Carassius gibelio (silver crucian carp): 127933555
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Entry
127933555 CDS
T08819
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127933555
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127933555
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127933555
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127933555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
127933555
NCBI-ProteinID:
XP_052386561
LinkDB
All DBs
Position
A2:complement(23384907..23393286)
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AA seq
942 aa
AA seq
DB search
MPLRLDIKRKLSARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKLG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSEKVAASQETNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSSDPEHQFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNAAMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLINTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLREAFVAEQYLRETCLGKTRPATDYPLVTPNEERNVLEEA
TGYEPKGIFPTPTQQVKDAEEVPEDVGVLASVTAAVSAPVVAAVPTVSHAESQPAEKTKK
ELPKVTAAEQKIIDELEDDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggatatcaagcgtaaactctcggctcgatctgaccgtgtcaaaagc
gtagacctccatccgtctgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccatgaaacacagactctggttaagacttttgaagtctgtgaccttccagta
agagcctccaagtttgtggccaggaaaaattgggtcattactggtgctgatgacatgcaa
attcgggttttcaactataatacactagagagagtacatatgtttgaggcccattcagat
tacattcgctgcatcgctgttcatcccacccagccctacatcctcacaagcagtgatgac
atgttgataaagctctgggactgggaaaagaaatggtcctgcagtcaggtgtttgagggc
cacacacactatgtcatgcagattgtcatcaaccccaaagacaacaaccagtttgcgagt
gcatcgctggacagaaccattaaggtttggcaactgggctcttcctctcctaacttcact
ttggagggccatgagaagggggtgaactgtatcgattattacagtggaggagataaaccc
tatctcatatctggagctgatgacagactggtcaagatttgggactatcagaataagaca
tgtgtgcagacactcgagggtcacgctcagaatgtgtcctgtgtaaacttccacccagag
ctgccaatcatcatcactggatctgaggatggcacagttcggatctggcactccagcact
tatcgtctagagagcaccctgaactatggtatggagcgggtgtggtgtgtgtgtggctta
cgcggctccaacaatgtggcattgggctatgacgaaggcagcatcattatcaagcttggt
cgtgaggagccagccatgtcaatggataccagtggaaaaatcatttgggccaagcactct
gagattcagcaggctaacctcaaagccatgggggatgctgagattaaagatggcgagagg
ctgccactggcagtgaaagacatgggcagctgtgagatctatcctcaaaccattcagcac
aatcctaatggaaggtttgtggtggtttgcggagatggagagtacatcatctacactgcc
atggctctaagaaataagagctttggatctgcacaggagtttgtctgggcccatgattca
tcggagtatgcaattcgggaaagcagcagcgtggtgaagatcttcaaaaatttcaaggag
aaaaaatcttttaagccagactttggagcagaaggcatctatggtggtttcttgctgggt
gtccgatcggtgaatggcttggctttctatgactgggataacacagagctgattcgtcgc
attgagatccaacccaaacatattttctggtccgactctggtgagctggtgtgcattgcc
acagaggagtctttcttcatcctgcgttatatgtcagagaaggtggctgcatcacaggag
acaaatgagggggttactgaagatggtatcgaagatgcttttgaggtcctgggagagatt
caggaagtggtaaagactggtctgtgggtaggagactgtttcatttacaccagctcagtc
aacagactcaactactttgttggaggagagattgtcactattgctcacctggacagaacc
atgtaccttctgggatacattcctaaagatgaccgtctttacctgggcgataaggagctg
aacatagtgagttactctcttctggtgtctgtcctggagtaccagacagctgtcatgcgc
agagactttggcatggcagacaaagtgctgcccactatcccaaaagaacagaggaccaga
gttgcccacttcctggaaaaacagggtttcaagcagcaggctctggctgtgtcctctgat
ccagagcaccagttcgagctggcgctacagttaggagagctgaaaattgcttatcagcta
gcagtagaagctgagtcagagcagaagtggaagcagttggcagagttggccatcagtaag
tgccagtttagtttggcacaggagtgcctccatcatgcgcaggactatggaggacttctg
ctcctggccacagcatctggcaacgccgctatggttgccaagcttgcagaaggggcagag
cgtgatggcaaaaacaatgttgccttcatgacctacttcctgcagggaaaactggacaac
tgtttggaacttctgatcaacacaaatcgtctgccagaagcagcctttcttgcccgcaca
tatctgcccagccaagtgtccagggtggtgaagctttggagagagagcttgtctaaagtg
aatcagaaagctgcagagtctctggcagaccccacagagtatgagaacttattcccaggc
ctgagagaggcctttgtggcagagcagtacctgagagagacatgcctcggcaaaaccaga
cctgccactgattatccactggtcacgcccaatgaagaaaggaatgtgctggaggaggcc
actggttatgaacccaagggaattttccccactcccacgcagcaggtgaaggatgcagaa
gaggtcccagaggatgtgggtgttttggcctcggtgacggcagccgtctcggctccggta
gttgcagcggtgcctactgtgagtcatgcagaatcccagcctgctgagaagacaaagaaa
gagcttcccaaagtgacagcagcagaacagaagattattgatgaattggaggatgacttg
gataacatggagcttgatgacattgacaccacagacgtcaatctggatgacgacttctta
gacgactaa
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