Carassius gibelio (silver crucian carp): 127933855
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Entry
127933855 CDS
T08819
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127933855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127933855
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127933855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_ACSF4
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR41
BBS2_Mid
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SPT8
DSE1_N
Beta-prop_EIPR1
CFAP251_N
Beta-prop_Vps41
Beta-prop_DCAF12
VPS11_N
KNTC1_N
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
ASA1
Beta-prop_IFT140_2nd
Tnp_22_dsRBD
Beta-prop_At4g14310
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
127933855
NCBI-ProteinID:
XP_052386840
LinkDB
All DBs
Position
A18:complement(3961259..3967814)
Genome browser
AA seq
518 aa
AA seq
DB search
MASFKPTKVQFLPKLGEKVTEDTLYWKNYKSPVQMKEFGAVTKIDFSPLTPHNYAVTAST
RIHVYGLHSQEPIRSFTRFRDTAYGGSFRGDGKLLVAGSEEGLIRLFDISGRVALRQFTG
HSKAVHVTSFLSDGFRVVSGSDDLTCRVWDVPSAVEISSVTEHTDYIRALAPSKLNPDLF
VTGSYDHTVKVFDMRSGSSVMTMQHGHPVECVLLYPSEALLVSTGGRYVKIWDLLKGGQE
LVSLKNHHKTVTCACLSSVGNKLLTGSLDRHVKVYNSSYKVVHNFDCDASILSMAVAPDD
EVLAVGMTNGVLSVRHRKHKKDKETLTSRRRRGPSYRVFVKGKNFMPRQDDFLVSKPVKQ
YLRKYDKQLKSFEVSKALDTALQTWTRTSKPEVTVAVIIELNRRGTLKNALAGRNEESLT
KILNFLLKHIFDPRFSRPLLMVGDIVLDLYRQVLHQSPVVERLLQRLMEVLGREEELQQE
LLQVLGILDTLFASLTPRKEVASLAAIPVDQGPQLQAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacccaccaaagttcagttcctccctaaactcggagagaaagtaaca
gaggacacgctgtactggaagaattacaagtctcccgtacaaatgaaagagtttggtgct
gtaacaaagattgacttctctcctctcacacctcacaattatgccgtcaccgcctccacc
agaatccacgtatatggacttcactctcaagagcccatacggagcttcacacgttttcgg
gatacagcgtatggagggagcttcagaggcgacgggaagcttttagtggcaggaagtgaa
gagggtctcatccgtctctttgacatcagcggccgagtggctctcaggcaattcacagga
cactccaaggcggtacacgtgacctcgttcctgtctgatgggtttcgtgtggtgtcgggg
tctgatgacctgacgtgccgcgtgtgggacgttcccagtgctgttgagatcagctcagta
actgaacacacagactacatcagagctctcgcccccagcaaactcaacccagatctgttt
gtcacaggttcgtatgatcacacagtgaaagtgtttgacatgcggtcaggaagcagtgtg
atgaccatgcaacatggtcatcctgtggagtgtgtgctgttatatccgtcagaagccctg
ctggtgtccacaggagggcgctatgtgaaaatttgggacctgttgaaaggcggacaggag
cttgtttctcttaagaatcatcataaaactgttacatgtgcatgtctgagttctgtagga
aacaaactgctcacaggatcactggacaggcatgtcaaagtgtataactcctcttataag
gttgtacataatttcgactgtgatgcatctatcctcagtatggctgttgcgcctgatgat
gaagtgcttgctgtggggatgaccaatggtgtgttgagtgtcaggcacaggaaacacaaa
aaagacaaagagacgttaactagtcgaaggcgaaggggtccgtcataccgggtctttgtc
aaggggaagaactttatgcccagacaggatgatttcttggtcagtaaaccggtgaagcag
tatctacggaaatatgacaaacagctgaaaagctttgaggtgtccaaagcgctggacaca
gctctgcagacatggacacgcaccagtaaaccagaggtgaccgtagcggttatcatagag
ctcaaccgcagaggaactctgaaaaatgctctcgcaggacgaaatgaagagagcttaacc
aagatcctcaacttccttctcaagcacatctttgacccacgcttttctcggcctctgctc
atggttggggatattgtgcttgatctgtatcggcaggttcttcaccagtcacctgtagtc
gagcggcttctgcagcgtctaatggaggttttgggtcgagaagaagaacttcagcaagag
cttctacaggtcttaggaatcctggacacacttttcgcatccctcacccccagaaaagag
gttgcgtcccttgctgccattccagtagatcaagggccacagctacaagccgcctga
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