Carassius gibelio (silver crucian carp): 127933993
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Entry
127933993 CDS
T08819
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127933993
03036 Chromosome and associated proteins [BR:
cgib03036
]
127933993
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127933993
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127933993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
127933993
NCBI-ProteinID:
XP_052387098
LinkDB
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Position
A18:10826444..10835852
Genome browser
AA seq
788 aa
AA seq
DB search
MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAVLEQAQAEGEPVVEAVNS
SVEMMVMDSLDPALLQMKTEVMEAAVGAPLGVAGAAHEATVTTVDDTQIITLQVVNMEEQ
QLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKV
GANGEVETVEQDELQAQDNQPPQQEEEDMVEAQNEDPNWSKDPDYTPPVKKAKKTKKSKL
RYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELC
SYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAF
VTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDT
YKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD
LGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMV
MHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMA
RHAENCNGMDSGDGENGAPPKRGRGGRKRKMRSRKDDDDDDSDEHGEPDLDDIDEEEDDD
LFDDDIDQMDVEQAPPSIPIPAPAEPPVKRKRGRPPKNAAKASPTKSVAKTTTAAAAIIQ
VEDESTGAIENIIVKKEPEGMDAASAAQPVVEEVEAVEAGVETVQLDIPEAAPNGDLTPE
MILSMMDR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgactgaggcagtggtggaagatgcaggggatgctttcaaggccaag
gaatgtaagacgtaccaaaggcgacgagaagatgaggaagtgggtgctgaattgctgcag
gctgctgtgttagagcaagcccaggctgaaggagagcctgtggtggaagctgtcaacagc
agcgtggagatgatggtgatggactccctggaccctgccctgctccagatgaaaacagaa
gtcatggaggctgctgtcggtgcacctcttggtgtggctggtgccgctcatgaagccacg
gtcaccactgtcgatgatactcagatcatcaccttacaggtggtgaacatggaagagcag
cagttgggcttgggagagctgcagctggtgcaggtgcccgtttcagctgtgcctgtcact
gccgctactgtggaagagctgcaggggacgctggtggatgccactgccatgcctaaagat
ggggagccggtcatctgtcacaccctgccattgcctgaaggcttccaggtggtcaaagtg
ggtgcaaatggagaagtggaaactgtggagcaagatgagctccaggcccaagataatcag
cctccacagcaggaggaggaggatatggttgaagcccaaaatgaagacccaaactggtcc
aaagatccagactacacaccccctgttaaaaaggccaagaagactaagaaaagcaagctg
cgttataacaccgagggtgataaagacatggacgtgtctgtgtatgactttgaggaggaa
cagcaagagggactgctctctgaagtcaatgctgagaaagttgtgggtaacatgaaaccg
ccaaaaccaaccaaaattaagaagaaaggtgttaaaaagacattccagtgtgagctgtgc
agttacacttgccctcgccgttccaatctggaccgccacatgaagagccacacggatgag
aggcctcacaagtgccatctttgtggacgagccttcaggactgtgacgttgctgaggaac
cacctcaacacccacacaggcaccagaccacataagtgcactgactgcgacatggccttc
gtcaccagtggagaactggtgcgacaccgacgctacaagcacactcatgagaaaccattc
aagtgctccatgtgtgactatgccagtgtagaggttagcaagctaaagcgccacattcgc
tcccacactggagagcgtccgttccagtgcagtctctgcagttatgccagcagagatacc
tataagctgaagagacacatgaggacccactcaggagagaagccctatgagtgctatatc
tgtcatgcacgttttactcagagtggtaccatgaagatgcacatactgcagaaacacaca
gaaaatgtggcaaagtttcactgcccccactgcgacaccgttattgcccgcaagagtgat
cttggtgtgcatctccgtaagcagcattcctacattgagcagggcaggaagtgccgttat
tgtgatgcagttttccatgagcgctatgcgctcatccagcatcagaagtcccacaaaaat
gagaaacgcttcaagtgtgatcagtgtgattatgcatgccgtcaggagcgtcacatggtc
atgcacaagcgcacccatactggggagaagccatatgcctgcagccagtgtgagaaaact
ttcagacagaaacagctgctggacatgcactttcggcgctatcacgaccccaattttgta
cccacatcctttgtatgcaccaagtgcggcaagaccttcactcgcaggaataccatggcc
agacatgcagagaactgcaatggtatggattctggtgatggagagaatggagctcctccc
aaaaggggccgtggaggccgaaaaaggaaaatgcgatctagaaaggatgatgatgatgat
gatagtgatgagcatggtgaacctgaccttgatgacattgatgaagaggaagatgatgac
ctatttgatgatgacattgaccagatggatgtggaacaggctccacccagcattcccatc
cctgcgccagccgaacctcctgtcaagaggaaacgtggcagacccccaaagaatgcagcc
aaggcttctcctaccaagtctgtcgccaaaaccaccacagcagctgctgccattatccag
gtggaggatgaaagcacaggggccattgagaacatcattgtgaagaaggagcctgagggc
atggatgcagcttcagctgcccagccggtagtggaggaagtggaggctgtcgaggctggt
gtagaaacagtgcagctagacatccctgaagctgcgccgaatggtgatcttactcctgaa
atgatccttagcatgatggaccggtga
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