Carassius gibelio (silver crucian carp): 127934029
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Entry
127934029 CDS
T08819
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127934029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127934029
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127934029
Complex B
127934029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
DUF7230
Motif
Other DBs
NCBI-GeneID:
127934029
NCBI-ProteinID:
XP_052387165
LinkDB
All DBs
Position
A18:14765320..14771109
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AA seq
275 aa
AA seq
DB search
MTNQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSPSLKMRGQAFVIFK
EINSASSALRSMQGFPFYDKPMRIQYSKQDSDIIAKMKGTYVERDRKKEQKKPKAPDAGA
GKKASAATAAMAGVPAAMPGMPPLSQAPRMMPMPGQPPYMPLPGMMPPPGMAPGQMPPGQ
MMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIA
FVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccaggagatgcggttaaatcacactatttacatcaacaacttgaatgaaaag
atcaaaaaagatgaactgaagaagtcgttgtatgctatattctcccagtttggacaaatt
ctggacatccttgtctctccttcactgaagatgagggggcaggccttcgtgatcttcaag
gagatcaacagtgcttccagcgcactccgctctatgcaaggctttcccttttatgataaa
cctatgcgtattcagtattcaaagcaggactctgatataattgcaaaaatgaagggcaca
tatgtggagcgagaccgtaagaaagagcagaaaaagcctaaagcccctgatgcaggtgct
gggaaaaaggcttctgctgccacagctgccatggccggagtacctgcagccatgcctgga
atgccacccctgagccaagcccctcgtatgatgccaatgcctggtcagcctccctacatg
cctctgcctggcatgatgcctcctcctggtatggcacctgggcagatgcctccaggtcag
atgatgccaggacaaatgcctgggcagatgccacagcaggtgtccgaaaaccctcccaac
cacatcctgtttctcaccaatctcccagaggagacgaacgagctcatgctgtctatgctg
ttcaaccagtttcctggattcaaagaagtccgtctcgtccccggccgccacgacatcgcc
tttgtggagtttgataatgaggtgcaggcgggtgcagccagagaagctttgcaaggcttt
aagatcacacagagcaatgctatgaaaatctcatttgcgaagaaataa
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