KEGG   Carassius gibelio (silver crucian carp): 127934169
Entry
127934169         CDS       T08819                                 
Name
(RefSeq) LSM14A mRNA processing body assembly factor b isoform X1
  KO
K18749  protein LSM14
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127934169
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127934169
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 127934169
NCBI-ProteinID: XP_052387327
LinkDB
Position
A18:1795498..1804116
AA seq 485 aa
MSGGTPYIGSKISLISKAEIRYEGVLYTIDTENSTVALAKVKSFGTEDRPTDRPIPPRED
VFEYIIFRGSDIKDLTVCEPPKPTCNLPQDPAIVQSSLASSAGPAAPSFQSYAPFSRAPY
SQFSSSPMVPQPLGAVVTAGSSSGPAFGSEASTNAPLSQSSALPSRSRSLSATKPEGRSS
PSLEPLRKTPTLEHAVQTAPVAPSAAASSTVNQRSSGVSRPAFNTQKSAENQEQKATASD
VQRVPRPESDSNRPDNKDPNKRHSGGGAPPVRKGRGSGGGGGGQHGRGRFNGRRDGPMKF
EKDFDFESANAQFNKEEIDREFQNKLKIKDEKSEKPEKTLNGEEKTDSGVETQNSESNAD
EEDPLGPNCYYDKSKSFFDNISCDDSRKEKSGGAFGRERRQTWAEERRMNAETFGIPLRY
NRGRGGFRGRGGGGGMGFRGGRGRAASRGSFMPSRGGGFRGGFRGGRGGREFSDFEYRKE
NKVAA
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgagcggagggacgccttacatcggcagcaagatcagtctgatctcaaaggccgagatc
cgatatgaaggagtcttatacacgatcgacactgagaacagcactgtggctctggctaaa
gtgaagtcctttggcactgaggaccgtcccacggacagaccgatccctcctcgagaggat
gtctttgagtacatcatattcagaggaagtgacatcaaagacctgacggtgtgcgagccg
cccaaacccacctgcaaccttcctcaggatcccgccatcgtgcagtcttctctggcatcc
agcgctggccccgcggctccttccttccagtcgtacgccccgttcagtcgggccccgtac
agccagtttagctccagtccgatggtcccgcagccgttaggagctgtggtcaccgctgga
agcagctcaggtcctgcgttcggtagcgaggcgagcactaacgcccctctgtcccaaagc
tctgctcttccctcacgctctcgctcgctgagtgctaccaaacccgaaggtcgttcgagc
ccatctctggagcctttaaggaagaccccgaccctggagcatgcggtccagacggcccca
gtcgccccgtctgcggctgcatccagtacagtgaatcagaggagctctggagtgagccga
cccgctttcaacacccagaaatctgctgaaaaccaggaacaaaaagctacagcgtctgat
gttcagagggttcctcggccagaatcagactcaaacaggcctgataacaaagacccaaac
aaacggcattctggtggtggcgctcctccagtgagaaaggggcggggcagtggtggcgga
ggtggcggtcaacatgggcggggcaggtttaacgggcgtagagatggaccaatgaaattt
gagaaagactttgactttgagagtgccaatgcacagttcaataaggaagagatcgaccgc
gagttccaaaacaaactcaaaattaaagatgagaagagtgagaaaccggagaagactctg
aatggggaggagaagaccgattcaggcgtggagacccagaacagtgagagcaacgctgat
gaggaggatccactgggacccaactgttactacgacaaatccaagtccttcttcgacaac
atctcgtgtgatgactccagaaaggagaaatctggaggtgcttttggaagggagcggagg
cagacctgggctgaggagaggaggatgaacgccgagacgttcgggattccgctgcgatac
aatcgtggacgtggtggtttccgtgggagaggcggcggcggcggcatgggcttccgcggg
ggccgcgggcgagcggctagcaggggttcgttcatgccctcccgcggcggaggattcaga
ggcgggtttagaggcggcagaggaggacgagagttctctgactttgagtacaggaaggag
aataaagtggcagcgtag

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