Carassius gibelio (silver crucian carp): 127934170
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Entry
127934170 CDS
T08819
Name
(RefSeq) deubiquitinating protein VCPIP1-like
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127934170
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127934170
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127934170
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C64
127934170
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
127934170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
DUF5817
Gla
Motif
Other DBs
NCBI-GeneID:
127934170
NCBI-ProteinID:
XP_052387333
LinkDB
All DBs
Position
A2:24797401..24804003
Genome browser
AA seq
1102 aa
AA seq
DB search
MSLIPGSKQKDRRILCGMCPDPQCQAKLFFPAHTSMSIECTECGQRHEQKNLANVEEVTD
PDVVLHNLLRNALLGVPGPPKKGSELVKVLGLSNYHCKLLSPVLTRYGMDKQTGTAKLLK
EMNQGEIFDCSLLGDRAFLIEQEHVSTVGYGRDRSGSLIYLHDTLEEIKKANLNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNIDRYKALFQDFIDAAEWEDII
NECDPLFIPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGLPLPRLPAALLPKAWGVPQELIHKYVS
LDSSGSCVIGGDRSLQEKYLLRLVGAMEDVFMDKHSIHPALVADVHQYIYRRTGVIGVQP
EEVTEAAKKSVQEGRLHRCLVCNALSELHVPAEWLIPGGKLYNLAKSTHGTLRADKNYSF
PLNSLVCSYNPEKDVLVPDYKLSTLTACTWCHGTSVRRVCGDGSVVYLDGDRTNTRSEGG
KCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEMDQTLNSNVYDVTMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKRSQEEYNPVAIEGAHVQDGRDGSESATQPPTKI
ILTGQKGKTLHKEELVMSKTERVLQHSISEQAALSQRRSTDRLRQQDSRLSFPSSSSSSA
PSTPTKVPASSGEKKIRVTTSDGRQAMLTLQPHTTYAELQNSIIQVFNLSSGQLCIRHGF
PPKELPPPRPEDQNQPVALQHGDRISVEVLKESSPETHMTQTQTPQTHTHSDPRLSRTSS
RELQENIDLEMSSLCLLAALMGEDIWTYAKKLPHLFQQGGVFYNIVKKDMGLLDGKHCTL
PHLLGKTFVFNAAEERLELCVDTAGHFPVGPDVEELVQEALSQLHSDAASRSREGSPAHG
LRLGAGGAVRRKEQNVTAFQGKGHSLGSAPPIRRQHSSGVDLSGSVQGEGLTLSGEELVR
VAPGMLTLREGRGLGLEPAVIEAQRQRLQEMVSSIQASMDKHLCQHAAVRQDAKEEEAPD
KQEDMESHGAEPPSTFEPMDQS
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgattccgggctcgaaacagaaggacaggcgcattttatgcgggatgtgcccg
gacccgcagtgccaggcgaagctcttcttccccgcacacacctccatgagcatcgagtgc
actgagtgcggccagagacacgaacagaagaacctcgcgaatgtggaggaagtgactgac
ccagatgtagtgcttcataatttgctgagaaacgctttgctgggtgtgccaggccctcct
aaaaagggttcagagctggtgaaagtgttgggactgtccaactatcactgcaagctgctg
tctcccgtcctcacccgctatggcatggacaaacagacaggcactgccaaactcttgaag
gaaatgaaccagggagagatcttcgactgctcgcttctcggggaccgggcatttctcatc
gagcaagagcatgtgtccactgttgggtatggacgagaccggtcaggaagcctgatctac
ctgcatgacactttggaggagatcaagaaagcaaacttaaatagagagtgtcttattcct
gtgcatgtggacggagacggacactgcctggtccatgccgtgtccagggcattagttgga
cgtgaactcttctggcatgctcttcgagaaaacctgaagctcaatttcaaacagaacata
gaccgctacaaagctcttttccaggactttatagatgctgcagaatgggaagacattatt
aatgagtgtgacccattgtttatccctccagaaggcgttccattgggtcttaggaatatt
cacatttttggcctggcaaatgtactgcacagacccataatcctgttggactcactgagc
ggtatgcgcagctcaggcgattactccgccaccttcttgccaggcctggttccagaggag
cagtgccgaggaaaagatggcactctgaacaagcccatctgcatcgcctggagtagctct
ggcagaaatcactatctacccctagtgggcatcaagggcttgcctttgccccgtttacct
gctgcacttctcccaaaagcttggggtgttcctcaagagctgattcacaaatacgtgagt
ttggactccagtggaagctgtgtgatcggcggcgacaggagcctgcaggagaagtacttg
ctgcggctcgtaggcgcaatggaggacgtcttcatggacaagcacagcatccaccctgct
ctagtcgccgacgtccaccagtacatatatcgacgcactggagtgatcggtgtgcagcca
gaggaggtgactgaagcggctaagaaatccgttcaggagggtcgtctccaccgctgcctt
gtctgcaatgccctctcggagctccacgtgccagcagagtggctcataccgggagggaaa
ctctacaacttggccaagtcgactcacggtacactacgagcggacaaaaactacagcttt
cctttaaatagtttggtttgttcctataacccagaaaaagatgtgctggtgcccgactac
aaactcagcacactcactgcctgcacctggtgtcacggaacttcagtgcggcgcgtttgt
ggcgacggctctgtggtctatttggatggagaccgtaccaatactcgctccgagggtggg
aagtgcggctgtgggttcaaacacttctgggagggcaaggagtacgacaatcttcctgaa
gcttttcccatcactctggagtggggcggccgtgtggtgcgtgagacagtttattggttc
cagtacgaaatggatcagactctcaatagcaatgtttatgatgtaacgatgcgtctcgtc
acaaaacacttccccggtgagttcggcagtgagattctggtccaaaaagtggtgaacact
attttgcatcacaccgccaagaggagccaagaagaatacaatccagtggccatcgaaggt
gctcatgtgcaggacgggagagacgggagtgaatctgccactcaacctcctactaaaatc
atcctgactggacagaagggcaaaaccctgcataaagaggagctggtgatgagcaaaacc
gagagggtcttacagcacagcatcagcgagcaggcggccctgtcccagcgccgcagcaca
gaccgcttgcgccaacaggattctcgcttgtcatttccttcctcttcatcatcctctgca
ccttccacgcccaccaaagtgccagcctccagcggagagaagaaaatccgtgtaacaacc
agcgacgggcggcaggccatgcttacactgcaaccgcacaccacctacgctgagctccag
aattccatcatccaggtcttcaacttgtcgtccggacagctgtgcatccgacatggcttc
ccacccaaagagctgcccccgccgcgtcccgaggaccagaaccagcccgtggcgcttcag
catggtgaccgcatctctgtggaagtgctaaaagagagttctcctgaaacgcacatgacc
cagacgcagacgcctcaaacgcacactcactctgacccacgactcagccgcaccagtagc
agggaacttcaggaaaacattgacctcgagatgtcatcactgtgtctcctggcagcactt
atgggtgaagatatctggacatatgccaagaaactgcctcacctgttccaacaaggaggg
gtcttctacaatattgtgaagaaagacatgggtctgttggacgggaagcactgcacactg
cctcatttgttgggtaaaacgtttgtgttcaatgctgcagaggagcgtttggagctgtgt
gtggacacagccggccattttccagtgggccctgatgtggaagagctcgtccaggaggcc
ctttcccagctccactcagatgcagcctcccgtagccgtgagggaagtcccgcacacggc
ttgcgactgggcgccggtggtgctgtgcgcaggaaagagcagaacgtcacggccttccag
ggcaaaggtcactcgttgggttccgccccaccaatcaggcggcagcacagcagcggcgtg
gatctcagcggcagcgttcaaggtgaagggttaacgttgtcaggggaggagttggtgcgt
gtggccccgggcatgctcactttacgcgaggggcgcggtttagggctggagcccgccgtg
atcgaggcccaacggcagcgcttgcaggagatggtctcaagcatacaggcatccatggac
aaacacttgtgccagcatgctgcagtaaggcaggatgcgaaggaagaagaggctcctgac
aaacaggaggatatggaaagtcatggtgcggagcctcccagcacctttgaacccatggac
cagtcttga
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