Carassius gibelio (silver crucian carp): 127934208
Help
Entry
127934208 CDS
T08819
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127934208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF6568
Motif
Other DBs
NCBI-GeneID:
127934208
NCBI-ProteinID:
XP_052387402
LinkDB
All DBs
Position
A2:24738526..24763760
Genome browser
AA seq
625 aa
AA seq
DB search
MACGGLMSAPVCLIENDENGKLHVKKEGKEILDGIHEPVVVVSVVGLYRTGKSYIMNRLA
GQQSGFALGSTIESKTKGIWMWCVPHPNKKGHTLVLLDTEGLGDVDKGNEKNDTWIFCLA
VLLSSTLVYNSLGVIDNTALEKLHYVTELTENIRVKAGVSQDEDRSTDFMRVFPSFVWAV
RDFTLELKRGDKLITSDEYLEGSLKLKPGSSSQTEQYNLPRRCLRQFFAVRKCFVFPRPA
STQNMRRMEKLTEKELDSEFLEQAKTFCCYIYNNAEPKTVTGGKTVTGTALGNLAEVYVE
AIRSGKVPCLENAVVSLAKIQNVRAVEEAMQLYMIEMLNMPQLPMRPEELSDIHKIAEKK
ATEVFITMSFNDNDQMYHQELMGKIHNEYQDMCQQNHEASRSQCEEVLLVVFDKLEKSIS
NGSYLKPGGNQQYRDTLTQLTSDYRAKTHSQIMSEIVLSKYLRAKEEAGKMILQADQSLS
AVEQEKEAQRLKNEILEQQKRSTEEQNQLQEQAFKDMQRTHDEHVNQLIRQMEKEHERMR
RDNERVLDAKLKEQGALLHQGFQQDASRMQREIESLKADMNKQETSQRSTLSKVVDGIGT
AATFLLPGFIPKAVGLGMSWLSKLF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtggagggcttatgtctgctccggtgtgtctcattgaaaatgatgaaaatggg
aagctgcatgtgaagaaagagggcaaagaaattctagatgggatccatgagccggtggtg
gtggtgtctgtggtgggactctaccgtacggggaagtcttacattatgaaccgcctggcg
ggacaacagtccggctttgctcttggcagcactattgaatcaaagaccaaaggcatctgg
atgtggtgtgtcccacaccctaataaaaaaggacacactctggtgctgctggacacagag
ggacttggtgacgtggataaggggaatgagaaaaatgatacatggatcttctgtctggca
gttcttctcagcagtactctagtgtacaacagcttaggggtcattgacaacacggcactg
gaaaagctgcactacgttacagagctgacggagaacattcgtgtgaaggcaggagtgagt
caagacgaggacaggtcaacagatttcatgcgtgtttttccatcatttgtctgggctgtt
cgtgacttcactttggaactgaaaaggggggataaactaataacatcagatgagtatctg
gagggctcattgaaactcaaaccaggaagctcatctcagactgagcagtacaacctgcct
cgtcgttgtttgcgacaattctttgcggtcaggaagtgctttgtgttccctcggccagct
agtacacaaaacatgagaagaatggagaaactgactgagaaagaactggattcagagttc
cttgagcaggcaaaaaccttctgttgttatatctacaacaatgcagagccaaaaactgtc
actggaggcaagacagttacaggaacagctctgggtaatcttgctgaggtttacgtagag
gcaatccgcagtggtaaggttccatgtctggagaacgcagttgtgtctctggctaagatc
cagaatgtccgtgcagtggaagaggccatgcagttgtacatgatcgagatgctcaacatg
cctcagcttcctatgcgcccggaagagctgtctgacatccacaaaattgcagagaagaag
gccactgaagtctttatcactatgtccttcaatgacaacgatcagatgtaccatcaagag
ctcatggggaagattcataatgaatatcaagatatgtgccagcagaatcatgaagcatct
cgcagtcagtgtgaggaagttctgcttgtggtgtttgataagctggaaaaaagcatttct
aatggatcatacctgaaacctggaggaaaccaacagtacagagacacgctcacacagcta
accagtgactacagagcaaaaacacactcacaaataatgagtgagatagtgttgagtaaa
tatttgagagccaaggaagaggctgggaaaatgattctacaagctgaccaatctctcagt
gcagtggaacaggagaaagaggcacaaagactaaagaatgagatcctagagcagcaaaaa
agaagcacagaggaacagaaccaattacaggagcaggcatttaaagacatgcaaagaacc
catgatgagcatgtgaatcagctcattagacagatggagaaagaacatgagagaatgagg
agagacaatgaacgagtcctggatgcaaaactgaaggaacagggagctcttctacatcaa
ggctttcagcaggacgcttccaggatgcagagagaaattgaaagcctgaaagcagatatg
aataaacaggaaacgtcccaacgctccacactcagtaaggttgtggatggtatcggcact
gctgcaacttttttgttgccgggttttattcctaaagcagttggtcttggtatgtcctgg
ctttcaaaactgttttga
DBGET
integrated database retrieval system
