Carassius gibelio (silver crucian carp): 127934295
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Entry
127934295 CDS
T08819
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127934295
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
127934295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
CAS_CSE1
Motif
Other DBs
NCBI-GeneID:
127934295
NCBI-ProteinID:
XP_052387535
LinkDB
All DBs
Position
A18:complement(9395112..9422988)
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AA seq
1716 aa
AA seq
DB search
MEDKSLRVADYFVVAGLTNSSKPFEEDVHPEDGGHRSSAQLKAPITDVAVVIRSLGEEVP
RGYTCVECTPSGLPAELNGGSLMGPQIFLCYRRGRDKPPLTDLGVLFEWKEKLKPDCQII
QTTPSGRPANISSSSSQRIYITYRRASENHSHTTLAVTDICVIVPGKGETPPHAFCKVDK
NLNSSMWGSSVYLCYKKSLAKSNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPMGASI
ECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQRSQLGLQANGLRP
DGSMTVHTNKSICLLSHWPFFDAFRNFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLWNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDFYEPP
TDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSNLHQQLDEGYQMSREEGHME
AFMSEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSEKPEDTRLIELDKSHRSEHTVYITPPELPALPEGEEAPMVYSYSGFPVLNTQLCELQ
DGPRVPEATSAVRQISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLW
FICLPAYVSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRQT
THPKDTHLSDASDLDSVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDS
LSKEEVRLGGGEEQNSSPDMKEKKDRNSCPLSQTILSEKEHSSLAVGIPPSAANGEISNV
FSEAPPQTKRPNSLDIFGDKPIRPRTLDLTPDKTVGVLREESVPALIETEAVGGVVSPPK
VAVERTTSCTVAMEKRVAMEREHLGVERSASCSSALGRVVKRTGIEAGFDPLSLMAAETQ
AHSEGDNADTPTARRDLAEEIHHYMNNLSSPLSQRSLSVDLKGHQTPSPHSSPRMSTALS
SPSTSNLQPQPRTRLFSSPSLPQGHVRRVREQRPTSLASPSSPSPSSSSFSMDSLLTPTL
DVFKSSFLFAGKGVAEKASRLYSRLSSQTSIAQDLNSDQVSVSSLGSGDPDCSSLVESDC
CVDPDGFSSPQRDASQPVTRPKRSPYRSNHCLESPSAPPRLYQQSSVMKALQTPDACSDS
SLSQSMQNYAVEMRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPFCGSPFLPLLN
VDIRNLGDQERSPSQDAHTCQTDTADELPQVYDATNNLSSGGKKHPEPVTVPYLSPLVLW
KELESLLENEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLPSSLAGLYLSSKHYCRDSQA
LQSCASEDSKNVLVQILWDNPRLHQDHIKPCYLLWKSYCANPAVSEEEEQAVSLELLQSV
VKSIQRNDVYQPMSQILQLLGTRLGFVRQRSLYRDILFLSLVALGKNSINIDSFDREYKM
AYDRLTPSQVKMTHNCDRPPSAGVMECRRTFGEPSL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagagccttcgtgtagcagactattttgtggtggcaggactcaccaactcg
tctaagcccttcgaggaagatgtccaccctgaggatgggggtcatcggagctcagcccag
ctcaaggcgcccattactgatgttgcagtggtgattcgctcccttggagaggaagtacct
cgagggtatacctgcgttgaatgcaccccctctggacttcctgccgaactaaatggagga
agcctcatggggccgcagatcttcctctgctataggagaggcagagacaaaccgccactc
acagacctgggtgtcctctttgagtggaaggagaaactgaagccggactgtcaaattata
cagaccacgccctctggtcgccctgctaatatcagtagctcctcctcccaaaggatctac
atcacatatcggcgtgcctctgagaatcactctcacaccacgctggctgtcacagacatc
tgtgtcattgttcccggcaagggagagacacccccacatgctttctgcaaggtggacaag
aatctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaaatctttggcc
aaatccaacacgcttgcattcaaagcaggtcttttgtccagatacccagaggaggattat
gattcctttcctttgcctgaatccgtgcccctgttttgcctgccgatgggagcatccatt
gagtgctggccttctcataccaaatattctctacctgtcttttcaacattcgttctcaca
ggcgcctctggagagaaggtttatggtgctgccatccagttctatgagccctacccagaa
gaacatttgactgacaagcagcgatctcagctgggcctgcaggctaacgggctcaggcct
gatggatcaatgactgtccacaccaacaaaagcatctgccttctctctcactggcccttt
tttgatgctttccgtaacttcctgaccttcctctacagatactccatctcaggtccacac
actctgcccatcgagaagcatatttcccatttcatgcacaaggttcctttcccttcctca
caaaggccacgtatcctggtgcagttgtctccacatgatagcctgatgctgagccagcct
gtttcctctccactccctctgagtggtggaaggctgtctacactgctgtggaacctcggc
cccaaaaatgcagtgactctgctggtgttggctgtgactgaacacaagatcctagtgcac
tccttacgtccagcagttcttaccagcgttaccgaggccctggtgtcgatgatttttccc
ttccactggccgtgcccgtacattcctctctgcccgctggccctggcagatgtgctcagt
gctccatgccctttcattgtaggggtggactcgcggtactttgacttctatgagccaccg
acggacataagctgtgtggacctggacactaacactataacacacaaagaagagcgcaga
tccctgacctggaagatcctgccaagaaaagcctgtaaacatctgattaacaccctgagc
aatctccaccagcaactggatgagggttatcagatgagccgtgaggaaggacacatggag
gcctttatgagtgagcgggaacctggcagtggtgggaagagtctggaaaccttggagctg
gagatccaggaggcttttctgcgcttcatggcggccatcttgaagggctaccgttcatac
ctgttgcccatcacacaggcaccttctgagaaagcaactgacgccagttcactcttcgat
ctgcaaggctttttgaagagtcgtgatcgatcccatcaaaagttttattccctcatgacc
aagacacagatgttcattcgtttcatcgaagagtgctctttcgtcagcgataaggatgca
agccttgctttctttgatgactgtgttgacaagctgttcggtacggagaaaggaggaaag
gtggacagcgaaaagccagaagacacaaggcttattgaacttgacaaatcccaccgcagc
gagcacacggtctacatcacacctccggagctgccagctcttccagaaggagaagaggct
cctatggtttacagttacagtgggttcccagtactgaacacccaactctgtgagcttcag
gatggtcccagagtccctgaagcaacatcagccgtgagacaaatcagtcccatcagccca
gctgccattttcaggcgctcccaacaggagatcaaatcagcccagaggatggctaagaca
tactcctcaatcccacagatgtggtccaagtgtctgctgaggcattgtcacggcctgtgg
ttcatctgcctgcccgcgtatgtcagcgcctgccactctaaagtgcgggcactgcatact
gcttacgacgtgctgcgaaacatgcaagacaaaaagttgcagcctcctgatgaggtgtgt
taccgggtcctgatgcagctgtgtgggcagtatggacagcctgttcttgctgtccgggtt
ctttttgaaatgaagaaagccggggtgcagccaaatgccattacctatgggtactacaac
agggctgttctggagagcacatggccctcctccaccagagggggatacttcctgtgggga
aagctgagaaatgtggttcggggtgtggtgctgttcaaacaagtatggaggaggcagacc
acccacccaaaagacacccatctttctgatgccagtgatctcgacagtgtcagccatggc
agtctggacagctctaacgattcagcggagcgagtttccattgatacagacttcactaaa
atggattccagtgatgacagatccagcacaggtggtcagtctgatcagggctatgattct
ctgtctaaagaggaggtgaggttaggaggaggtgaggagcagaactcctctccagacatg
aaggagaagaaggacagaaactcttgcccattatcccagaccatactctcagagaaagag
cattcatctcttgcggttggaatccctccatctgcagccaatggggaaatcagtaacgtg
ttctctgaagcccctccacagacaaaaaggccaaactccctggatattttcggagacaaa
cccataaggccacgcacgctggatctaaccccggataagacagtaggagtactccgcgaa
gaatctgttccagcactgatagaaacggaagcagtggggggcgtcgtgagcccacctaaa
gttgcagtggagaggactactagctgcacggttgccatggagaagagagttgccatggag
agggagcatctcggcgtggagaggagcgcgagctgcagcagtgctcttggccgagtggtt
aagaggacaggcatcgaagcaggttttgatcctctgtccctcatggcagctgagactcaa
gcccacagtgagggcgataatgcagacaccccaaccgcccgccgagacctggctgaagag
attcatcactacatgaacaacctgagcagcccattgagccagcggtctctcagtgtagac
ctaaaggggcatcagaccccttcccctcacagctctcctcgcatgtctacagcactcagc
tccccaagcacctccaatctccaacctcagccacgaacaagactcttctcgtcgccctcc
ctccctcagggccacgtacgcagggtcagggagcagcggcccacctccctggcttcacct
tcctcaccttctccctcctcttcttctttctccatggactccttgctcaccccgaccctg
gacgtgttcaagagcagctttctctttgctgggaagggcgtcgctgagaaagccagccga
ctgtattcacgactttcctctcagacgtccattgcacaggacttaaactctgaccaggtc
agtgtgtcctctctagggtcaggtgaccctgattgctcctctctggttgagagtgattgc
tgtgtagaccccgatgggttctcttccccacaacgggatgcctctcagcctgtcacacgt
cccaaaaggagcccttacaggagcaaccactgcctagaaagcccatctgcacctcctcga
ctttatcaacagtcttctgtaatgaaagctctgcagaccccagacgcgtgttctgattcc
agcctttctcagtccatgcagaactacgctgttgaaatgcgtatgtccagttgctcgcgc
tgtaacacctgtgagagtttggtgtatgatgaagagatcatggctggatggacagctgac
gattctaacctcaatagcacgtgccccttttgtggctccccatttctgcctctgctcaat
gtggacatcagaaacctgggtgaccaggaaagatctccctctcaagatgcacatacttgc
cagacagacactgcagatgaactaccacaagtttatgatgccactaacaatctatccagc
ggtggcaaaaaacaccctgagccagttaccgtgccctacctgagtcctctggtactttgg
aaggaactggaaagcttgctggagaacgagggggaccaggccatctcttctgcagccatt
gtggatcaccaccctattgtgttctggaatctggtgtggtttttccgtaggctggacctg
cccagcagcctggcgggcctctatttgagctccaaacactactgcagagattctcaggct
ctgcaaagttgtgcatcagaggacagtaaaaatgtcttggtccagatcctgtgggacaat
cccagactgcatcaggaccacatcaagccttgctacttgctctggaaatcatattgtgca
aatcctgcagtatctgaggaggaggagcaggctgtgagcttagagctgctgcagagtgtg
gtgaagagcatccagaggaacgatgtctaccagcccatgagtcagatactgcagctactg
ggcaccagactgggcttcgtccgacaacggagcttatatagagatatcctattcctgtct
ttggtggctttgggcaagaatagcataaatatcgattcatttgaccgtgaatacaaaatg
gcatatgaccgtttgacgcctagccaggtcaagatgacccacaattgtgaccggccaccc
agcgctggagtcatggagtgcaggagaacctttggggaacccagtctctga
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integrated database retrieval system
