Carassius gibelio (silver crucian carp): 127934320 Help Entry 127934320         CDS       T08819                                  Name (RefSeq) dmX-like protein 2 isoform X1   KO K24155   rabconnectin-3a Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04142   Lysosome Brite KEGG Orthology (KO) [BR:cgib00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     127934320  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cgib04131]     127934320 Membrane trafficking [BR:cgib04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     127934320  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     127934320    RAVE complex     127934320 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_EML Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_LRRK2 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR19_1st VPS11_N NBCH_WD40 Beta-prop_RIG_1st Motif Other DBs NCBI-GeneID:  127934320 NCBI-ProteinID:  XP_052387579 LinkDB All DBs Position A18:complement(19261595..19329656) Genome browser AA seq 3051 aa AA seqDB search MHLHQVLTGAVNPGDCCYSVGSVHDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV GCVECSQQLGRIAASYGNTVCIFEPIASNPNKRHKQLNYQWQKTGQFFLSAITYNLAWDP QGNRILAATECLQLWAPPSSDTLIEEEDSQLNDDRANELILNDWKCIWQCKTAAAVHITQ WSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDVTDKKIPAVHFSFVYLAHPRMVTGF SWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSTSFSSSLPNFA QKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHHANALCHFHI SASINPNTDIPAALAGSGLFSEDVSGGFMVHWLNNKDLSFTTSMDLFMQLLRKLSEQHLE QTTEDFEQEGTTKFDFDLDEMSDKGSSEHEEGDQEGSTKASSPGSSSSVPLPSVMLDRKL DALILEWNKNPDMLFTIHPLDGSFLVWHVKYLDEFIPGIFRQVQVSFSSRIPVAFPTGDA NSLSKNIMMYACTFMDKENCNALEDKRSERRVPQSASASAGLSAFGHSLAAVIGPAVMMV SKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNA LLTPPSGSGSIDGDQIGGVALQPTRPMRGIPGKQLRNAATRTFHDPNAIYSELILWRVDH IGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGSYCNSASACFVASDGKNLRL YQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNTQLLHV FQEDFILGYKPHDDIPDFSSINVPAAEEYQPPPFSEKFYLVVIEKDANQNSVLQMWHLHL RSVQACVEEPVNDHVFQNQLTVPLSQNYGDSSPDTTPAHSQLPRSSSSANLQSASKLILS SKLVYSQRLDLPPGVELIRATPSAGHLSSSSIYPVCLAPYLIVTTCSDGRVRFWHCRVDM ESSVPHPEETRSYQWEQWSLLKEEEDIDSSLCVAGRPVAVSCSYTGRLAVSFKQMLPENE GSMPQDFSMLVSIYECESTGGSEWVLEQTIHLDDFSKPVKTLDPRVSVDSNLVVYSKSDL FVTKDSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTGVKDGMAVTLP LGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMQVYAQWRQD EKPGNSDNNSISSPEGIGGRTISVSNEGRARSKSVFEGSAGIDDAFRPPAVIQDGGLFEA AHSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHL SRTISVTGSTAKDIIVAGRDGGRDYTEISSIPPLPLYALLSADQDTSYKMGEEVGKGAER ETQKQSEDQYSDLFQVQTVTTDDFVNFAAEKPEKKTRVINLSQYGPTYFGPEHAQVLSSH LMHSSLPGLTRLEQMFLVALADTVATTSAEVAGPTDKQYTGGDALDECGLRYLLAMRLHT CLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSELRAVGAGW WVRNINTLRRMVEKVAKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFSH NFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMIVARL YEADYESSSTCQGILYQKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTRALDTLLE QIYKEDDKNPDVLVKSCNPVVFSFYNYLRAHPLIIRRHFAKPEASGVAVGITSERNCADE INLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSVANVSAPQPKENG GKASDLAWGAESSAGLDWSQPMVKMEDEGLQLDWGYDKEEDEDEEGGLTMKKPEVEDEEA KKPSKSAAMQHEGSKGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYN WLEKEIEAMHYICNYKFEGKAAAGQLEKWGDDGSLDLEDSQIRGEAGAYERHQMERRRLQ AKQLHAERRKSWLRENQALLRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQEMTVKQL QSPLPLPTTLPLLSASIAPTKTVIANPVLHLRNHIHDVLYTTVQMEAPPHPDILDDRVNA LHTLAASLSACIYQSLCDSHSYSSQSETSQFTGMVYQGLLLSDRRRLRTESIEEHATPTT APAQWPGVSSLISLLACAQGDDQIRLNVMLCEAVVAVYLSLLIHGLGTHSGNELFRLAAH PLNNRMWAAVFGGGAKLIVRPKRPPEITPASLESNRQTEFHSENKPAVPPPTPPAEDVDR QRRRFNMRMLVPGRPVKETPATPPPIPVERPTYKEKFIPPELSMWDYFVAKPFLPLSDSG ALYDSDESGGSDNEDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLP LTGLDFTELPVTSPLANAVLKTLENWEQILQEKMNKFDSPPPNYINTYPTDLSAGGGPAI LRHKAMLEPDNTPFKSKQRHSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESLDDHV DHLIKNYVTGAQKTNKMEADMGYPGGKAKIIHKESDIIMAFAINKANTNELVLASTHDVQ EVDVSSLLAAQPYTWIGEDCDKESRSSDDVDYRSSHTNIAQASAGPFAPQQMAASSSMPW LGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAG NARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCSDFAFITSSS LIGTAGQSNDGRNVCLWDTLISPSNSMIHAFQCHENGATVIQYAPKQQLIITGGRKGFVC IFDIRQRQLLHTFQAHDSAIKALAMDSTEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHA KQSIFRNIGAGVMKIETCPGNRIFTCGADGTLKMRVLPDRYNIPPSIFQIL NT seq 9156 nt NT seq  +upstreamnt  +downstreamnt atgcatctgcaccaggtgctgacgggggccgttaacccgggggactgctgctactccgtg ggaagcgtccacgacatcccgttcacggcctatggctcaggctgtgatatcgtgatcctt gcaagtgattttgagtgtgttcaaattattcctggagctcagaatggaaacatccaggtg ggctgtgtggagtgctctcagcagctcggccggattgctgcgtcttatggaaataccgtt tgcatttttgaaccaattgcttccaacccaaacaaacgtcacaagcaactgaattaccaa tggcagaagactggtcagttcttcctcagtgctataacctacaatctggcctgggaccct caaggcaatcgtatcttggcagcgactgagtgtttgcagctgtgggctcctccgagcagt gacactctgatagaggaagaggacagtcagctgaatgatgacagagctaatgagctcatt ctcaacgactggaaatgtatctggcagtgcaaaactgctgctgctgttcacatcactcag tggtctccagacggggaatactttgccacagctggaaaggatgactgcctgttgaaggtg tggtatcccaccacaggatggaagtctgcagtggtgatgccagacgtgactgataaaaag atcccagcggttcatttctcatttgtgtatctggcacatccgcgtatggtcacaggcttc tcctggaggaagaccagtaaatatatgcccaagggctctgtatgtaacgtgttgctgacg tcttgcgcggatggcatctgtcgtctgtggagtgagaccctcttacctgaggacagtctg ttggggggacagatctcggagaacagcaccagcttcagctcctctctgccaaactttgct cagaaagacaagatacagcacgctctggagtctatacaccacctcaagcacctgcgaagg ggccgcagaagatcgtccgccctggtagcccacacagagctgctgcccagccagctgggg tcccacgaaactcaccgtcacatttcacaccacgccaatgccctctgccatttccacatc tctgccagcatcaatcccaacacagatatccccgcagcactggctggatcgggcctgttt tctgaggatgtcagtggagggtttatggttcactggctgaataataaagatctgagcttc accacctccatggacctgtttatgcagctgctgcgcaaactttctgaacaacacctggaa caaaccactgaagactttgaacaggaagggacaaccaagtttgacttcgatctggatgag atgtctgataagggctcttcagagcatgaggagggcgatcaggaggggagcaccaaggcc tcttctccaggttcgagcagcagtgttcctctgccctctgttatgctggatcgaaagctg gatgctctcatcctggagtggaacaagaatccagacatgcttttcactattcatccgctt gatggatctttccttgtctggcatgtcaagtatctggatgagttcatacctggcatcttc agacaggttcaggtgtcgttctcctctcgtatcccagtggcattccccacaggcgatgct aattccctcagtaagaacatcatgatgtacgcatgtacttttatggacaaagagaactgc aacgctctggaggataagagaagtgagcggcgggttcctcagagtgcatctgcgtctgcg gggctcagtgcttttggacactctcttgctgctgtcatcggccctgccgtcatgatggtg tccaaacacgttgatggatcgctcaaccaatgggctgtgacctttgctgagaagtccgcc ttttcgaatgtcctcacagtttcacacaagttccgttactgtggacaccgtttccatctc aatgatttggcttgtcacaccgtccttcccttgctgctgacatcatctcatcacaatgca ttgttgactccgccctctggatctggaagcattgatggagatcagattgggggtgtggct ctacaacctaccaggccaatgagaggcattcctgggaaacagctgcgaaatgcagccaca cgtacattccatgacccgaacgccatctacagtgagctgatcctctggagagtcgatcat attggcccactctcctgcacagggggcgtgtcagagctagcacgaatcaactcgcttcat acatctgcgttctccaacgtggcctggctgccaacactcgtccctagctcagtgcttgga tcatactgtaactctgcaagtgcgtgctttgtggcgtctgatggtaaaaacctgcgtctg tatcaggctgtggtggatgcccgcaaactactggatgaactctccgacccagagacctct aaactggtgggtgaagtattcaacattgtgagtcagcagtccactgcccgacctggctgc atcatagagctggatgtcattacaaaccagtgtggctcaaacacacagctgctccacgta tttcaggaggattttattttaggctacaaaccgcatgatgacataccagatttcagcagt attaatgttcccgctgcagaagagtaccagccccctcctttctcagaaaagttctacctg gtggtgatcgagaaggatgcaaatcagaactcagtattacagatgtggcatcttcatctg cgctcggttcaggcatgtgtggaagagccagtaaatgaccatgtgttccagaaccagctg acggttcctttgagtcagaactatggtgactcatctcctgacaccactccagctcatagt cagctgcctcgttcctcctcttctgccaacctgcagtcagccagcaaactcatcctgagc tctaaactggtctacagtcagcggctagaccttccaccaggggtggagctaatcagagct acgccctctgccggtcacttgagctcctcgtctatctaccctgtgtgtttggctccgtac ctgattgtgaccacctgttctgatggacgtgtcaggttctggcactgtagggtggacatg gaatcatcagtgccacaccccgaagagacacgttcatatcagtgggagcaatggagtctc ttgaaagaggaagaagacatcgacagctctttgtgtgttgcgggccgacccgttgcagtc agctgctcctacacgggaagacttgcggtgtcattcaaacagatgttgcctgagaacgag ggtagcatgcctcaggacttctccatgcttgtatccatctacgagtgcgagtcgacgggt ggctcagagtgggtcctggaacagacgattcaccttgatgattttagcaaacctgtgaaa acgctagatccacgtgttagtgttgatagcaatttggttgtctatagcaagtcagatctg tttgtaaccaaagacagccctaatatcaaacactttgtgcacctggactggctgtcaaaa gaagatgggtcgcacatcctgactgttggggttggatccaatatccttatgtatggacgt atctcaggggttgtcacagagcagacaggagtgaaggatggcatggcagtcaccttgcct ctagggggcagtataaagcagggaattcgctctcgttgggtgcttctgaggtctgtgaac cttgtctcttctgtggatggtaccccatccctgccggtgtccctatcctgggtgcgcgat ggcatcctggtggtaggcatggattgcgagatgcaggtttatgcgcagtggaggcaggat gaaaaaccgggcaactcagacaacaacagcatctcatctccagagggcattggaggtcgc actatatcggtttcaaatgagggcagagcgcgatctaagagcgttttcgagggtagtgca ggaattgatgatgcattccgccccccagcagtgattcaagatggcggcttgtttgaggct gcccattcattgtcacccactcttccgcaataccatccaacccagttgctagagcttatg gacctcggaagggtacgtcgtgctaaggccattttggcacacctggtcaagtgcattgct ggagaagttgcagtggtgagggatgtggaagcaggtgagggtggtgccaggaggcatcta tcccgaaccatcagcgtgactggtagcacggcaaaagacattattgttgctggccgtgat ggtgggcgagattacaccgaaatcagctccattcccccacttccactatacgcactgctt tctgcagaccaggacacctcttacaagatgggagaggaagtgggaaaaggggcagagcgt gagacacaaaaacagtcagaggatcagtactctgatctgtttcaggtgcagactgttacc actgatgattttgtgaactttgctgcagagaaaccagagaagaagactcgtgtgattaac ctatcacagtacggccccacgtactttggccctgaacacgcacaagtgctgtcttcacat cttatgcactccagcctgccaggtctcacacgccttgagcagatgttcctcgtggctctt gctgataccgtggcgactactagtgcagaagtagcaggacccacagataaacagtacact ggtggagatgctctagatgagtgtggtctacgttacctgctggccatgaggttacatacc tgtctgctgacatccctacccccactctacaggatgcagctactgcatcagggtgtgtcc acatgtcactttgcgtgggcgttccactcagaagctgaggaggagatgctgaacatgatt cctgccatgcagagaggagatccacagtggtctgagctcagggcagtgggcgccggttgg tgggtcagaaacattaacacactgaggcgaatggtggagaaggtagccaaagcagcattt cagaggcataatgatccgctggatgcagctctgttctatctggccatgaagaagaaggct gttctctggggtctctttaggtctcagcatgatgagaagatgacccagtttttcagccat aacttcagtgaggaccgctggaggaaggcggctttaaagaacgccttctctctcctgggc aaacagcgctttgaacagtcagctgcatttttcctgctcgctggctccctgaaagacgcc attgaggtttgtctggagaaaatggaggacatccagcttgcgatgattgtcgctcgtctt tacgaggctgattatgagagttcctccacctgtcagggtatcctgtaccagaaggtactt ggctgcaacagagatggaagtggcttctcctgtaccaaactgcaccctgacccattcctg aggagcattgcatactggatcatgaaggactacaccagagccctggacacactgctggag cagatttacaaagaggatgataagaaccctgatgttctggtgaaatcttgcaatcctgtt gtctttagtttctataactacttgcgtgcacaccctctgattattagacgacattttgcc aagcccgaagcatctggggttgcagttggtataacatcagaacgtaactgcgcagatgaa ataaacttgatagagcggaaactcttcttcaccaccgctaacgctcactttaaggtgggc tgccctctcctggcccttgaggtcttatccaaaatccctaaagtcactaagaaagcatct tctctgagtaagggctcatctgtggccaatgtcagtgccccccagccaaaggagaatggt ggaaaggcttcagatctcgcctggggagcagagtcctctgccgggttggactggagtcaa ccaatggttaaaatggaggatgagggtctacagttggattggggttatgataaggaagaa gatgaagatgaagagggtgggctgaccatgaagaaaccagaggtggaggatgaggaggcc aaaaagccatctaaatcagcagccatgcagcatgaaggctcaaagggtgagtcagaggtg gatgtgatcgccgaacagctgaagttccgagcctgtttgaagatcctcatgactgagctg cggacgctggcaacaggatatgaagtggatggtggcaaactgcgatttcagctctacaac tggctggagaaggaaatcgaggccatgcactacatctgcaactataagtttgaggggaaa gcggctgcaggtcagctggagaaatggggagatgatggatctctggatctggaagactca cagatccgtggtgaagcaggtgcatacgaacgtcatcagatggagcgacggcgtctgcag gccaagcagctgcatgcagagcggaggaaatcctggctgagagagaatcaggctctgctc agagtcttcctcagttactgcagtctgcatggagccaagggtggaggagtgacttctgtc aggatggagttactctttctgctgcaggaatcacagcaagaaatgacagtgaagcagctt caatcaccactccccctccccaccactctgcccctgctgtcggccagcatcgcccccacc aagactgtcatcgccaatccagtcctgcatctcagaaaccacatacatgatgtcctctac accactgtccagatggaggctccaccacaccccgacatactggatgaccgggtgaatgct ttacacacactcgctgcttctctatcagcttgtatctaccaatctctgtgtgacagccac agctacagtagtcagtcggagaccagtcagttcacagggatggtctatcaggggctgtta ctgagcgacaggcgtagacttcgcaccgagagcatcgaggaacatgcaacgcccaccact gcccctgcacagtggccaggtgtgtcgtctctgatcagtctgctggcgtgtgctcagggt gatgatcagattcgtctgaacgtcatgttgtgtgaggcagtggtggctgtttatctcagt ctgctgattcatggtcttggcacacattctggaaacgagcttttccggctggctgctcat cccctcaacaaccgcatgtgggcagccgtgtttgggggtggagccaaacttatcgtcaga cccaagcggccacctgaaatcactccagctagtctggagtcaaacaggcagacagagttc cactctgagaacaaaccagcagtacctcctccaacccctcctgctgaggacgtagaccga cagcgacgcaggtttaacatgcgcatgcttgttcctggacgtcccgttaaagagactcca gccacaccaccgcccatccctgtagagcggcccacctataaagagaaattcattccacct gagctcagcatgtgggattactttgtggccaaacctttccttcctctctctgacagcggg gcactgtatgattcagatgaaagcggtggtagtgacaatgaggatgacgatgatgatgat gatgccttcctctcagacacacagatgacagaacactccgatccaaactcctacagttgg tctctgatccgccttgtgatggtcaaacttgccctgcacaatgtcaaaacgttcctgccc ctgacaggactggacttcacagagttgccagtgacatctcccctggccaatgctgtgctc aagacactggaaaactgggaacagattctccaggaaaaaatgaacaaatttgacagccct ccaccaaactacatcaacacctaccccacggacctgagtgctggtgggggaccggctata ctaagacacaaagccatgctagaaccagataacacaccgttcaagtcaaagcaacgccac tccttccctgctcgccgtctgtggcattttctagtcaagcaggaggttctccaggagact ttgattcgatacatctttacaaagaaaaggaagcagagtgagtctttagatgatcatgtg gaccacctcataaaaaactacgttactggggctcaaaaaaccaacaagatggaggctgat atgggctacccgggaggcaaagccaaaatcatccataaagaatctgacatcatcatggca ttcgccattaacaaggctaacactaatgagttagtgctggcatctactcatgatgtccag gaagtggacgtgtcctcactgctcgcagctcagccttacacctggattggagaggactgt gacaaggagtctcgcagctctgacgatgtggactatcgctcgtctcacaccaatatcgcc caggccagtgccggtccctttgccccccaacaaatggcagcatcatcctctatgccatgg ctgggcagcggacagaccagcatgggtgccagtgtgatcatgaagaggaacctgaataac gtgaagagaatgacgtctcatcccatctatcagtactatatgacgggtgctcaggatggt agtgtgaggatgtttgagtggaatcgtccacagcagctcatctgtttcagacaggccgga aacgctcgagtcacacgcctctatttcaactcacagggcaacaagtgtggtgttgcagat ggcgagggctttttgagcctctggcaagtcaatcagacgtcctcaaaccccaaaccttat ttgagctggcagtgtcacagtaaaagctgcagtgatttcgccttcatcacgtcctctagt ctgatcggcacagcagggcagtccaatgatggcaggaatgtttgtttatgggacactctg atctctccaagtaactctatgatacacgcattccagtgccatgagaacggtgcaacggtt attcagtatgctcctaaacagcagctaatcatcacgggcggccggaagggattcgtctgt atttttgacatccgtcagagacagctgctccacacattccaggcacatgattcggccatc aaagcactggccatggactccactgaagacttcttcgtcaccggctcagccgaagggaat atgaaggtctggaagttggcaggacacggtctcatgcactccttcagcaccgagcacgct aaacagtccatattccgaaacatcggtgccggcgtgatgaaaatcgaaacctgcccaggc aaccggatcttcacctgcggagccgacgggaccctgaaaatgagggtccttcccgaccgc tacaacattccgcccagtatattccagatcctctaa

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