Carassius gibelio (silver crucian carp): 127934368
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Entry
127934368 CDS
T08819
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127934368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127934368
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127934368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
127934368
NCBI-ProteinID:
XP_052387662
LinkDB
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Position
A18:complement(23287308..23305687)
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AA seq
716 aa
AA seq
DB search
MSTETPSDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKAKKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNFDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKNNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHDKVH
SIYNRFLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYVDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLSFESNIGDLASIIKVERRRFMAFKDEYEGKETALLVDRYKYMDLYPCSPCE
LKALGYKDVSRAKYAALMPEAVVTPSTPALKDEADRKPEYPKPDTSQMIPFQPRHLAPPG
LHPVPGGVFPVPPTAVFLMKLLPPPSSFTGPFVQVDELMESLRRCVLPETVDAAVELITG
KQSEMSSEGNGPVENHAVANKSLKRPNADSDEEEDKGSIAPPIHDIYRVRQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaaactccatcggaccaggcggcggagtacatcccagagaaggtgaagaaa
gcagagaagaagttggaagaaaatccatatgacctggacgcttggagcatactgattcgt
gaagcacagaatcaacccatagacaaagcaaagaagacgtatgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctatacattgaagctgagataaaggctaaaaac
tttgacaaggttgagaagttatttcagaggtgcttaatgaaggtcctgcacattgacctg
tggaagtgctacctctcatatgtacgggaaaccaaaggaaaactgcccagctataaggaa
aagatggcacaggcttatgattttgcgttggataagattgggatggagattatgtcctat
cagatttgggtggattacatcaatttcctgaagggagtagaggccgtggggtcatacgca
gagaaccagcgcatcacagccgtcagacgcgtgtatcagagaggctgcgtcaaccccatg
attaacatcgagcagctctggagggactacagcaagtatgaagagggcataaatgtgcat
ttggccaaaaagatgattgaagaccggagcagagactacatgaacgctaggagagtcgcc
aaggagtatgagacggtgatgaagggtttggaccggaacgccccctcggtgccgccccag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccagtgggagaag
aacaacccactgcgtaccgaagatcagaccctcatcaccaagagagtgatgttcgcctat
gagcagtgccttctggtgctcggccatcacccggacgtctggtacgaagctgcacagtac
ctggaacagtccagcaagctgctggcagaaaaaggggatatgaacaatgccaagctgttc
agtgatgaggccgctaacatctacgagcgtgccataggaactctgctcaagaagaacatg
ctactgtacttctcttttgcagactatgaagagagtcgcatgaagcacgataaagtacat
agtatatacaaccgcttcctggccatagaagatatcgaccctactttggtctatatccag
tacatgaaatttgccagaagagctgaaggcatcaagtctggtcgctccatctttaagaag
gccagagaggaccctcgcacacggcatcatgtgtacgtcactgctgctcttatggaatat
tactgcagcaaggacaaatcggtggcctttaagatatttgagcttggactgaagaaatac
gttgacattcctgaatacattttggcgtacattgattacctctctcacttaaacgaggac
aacaacaccagagtcctgtttgagagagtcctgacgtccggcagtctttcccctgagaaa
tctggggaaatctgggcacgcttcttgtcttttgagagcaacatcggggacttggccagt
atcataaaggtggagcgaaggcgtttcatggcctttaaagacgaatacgagggaaaggag
acggctctgctggtggacagatacaagtacatggatttatatccctgctccccctgcgaa
ctcaaagccctcggctacaaggacgtgtctcgtgccaaatacgcagcactgatgccagag
gcggtggtcactccttctacccctgcactgaaggacgaggctgaccgcaaacctgagtat
cccaaacctgacaccagtcagatgatccccttccagccacgtcatctggcgcctcctggt
ctgcatcctgttcctggaggagtgtttcctgtccctcccactgctgtcttcctcatgaag
ctgctgcctcctcccagctcttttacagggccctttgtgcaggtcgatgagctgatggag
tctctcagaagatgtgtattaccagagacggttgatgctgctgtagagttgatcactggg
aagcagtcggagatgagcagcgaaggaaacggacctgtggagaaccacgctgtggctaac
aagtccttgaagaggcctaacgccgactcagacgaggaggaagataaaggatcgatcgca
cctcccatccacgacatctaccgagtgcggcagcagaagaggatccgataa
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