KEGG   Carassius gibelio (silver crucian carp): 127934372
Entry
127934372         CDS       T08819                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127934372
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    127934372
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgib03021]
    127934372
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127934372
Transcription machinery [BR:cgib03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     127934372
    Little elongation complex (LEC)
     127934372
SSDB
Motif
Pfam: ELL Occludin_ELL CMS1
Other DBs
NCBI-GeneID: 127934372
NCBI-ProteinID: XP_052387668
LinkDB
Position
A18:complement(12381203..12431313)
AA seq 588 aa
MAALRQEQRYGLSCGKINKSIPNKTIFHVKLTDTAIRTLEAYKNLKGSLPNQPAICFKGN
QGYIKIPASLDSPDAFRVFSFYLSSDSKDKPQASFDCIQQYISGDGREHLESQGSIQDKI
TVCATDDSYQMTRERMSQVEKDIWSRSAIEIKPGSTHPSKCVKIKKKQGLPTSLDNTNRH
SPSNKKNGTPSLVATRPLKERVIHILALKPYSKPELLLWLEREKASPKDKVDLSAVLDEV
AKLNPKDSSFTLKDDFYRHVRRDWPGYVEEERQLIQRVLARKLQPLSSSSSQLKSVQSSH
SFHKTSGDSPSQLSPLKNLSMKRPVPSDHPESQTPKKQRLLDQNKLLQSPSNRHLGSSMG
RSSSAHGNTSTAQQSPDGLSQRHKLGESNSVPKPEPAQQPSSSPKHPRTEPDICTDQQLA
NGQHKKKSKKHKEKERERLKPEWVETSPDLKQNQENVKDHERPNTPVSRSSPDELPDYLL
KYNTITDSEQQKRYKEDFCAEYDEYRDLHERIGKVTEIFVQLGSKIKTLSPGTHEYKVME
VQIMEKYRKYKKKFPGYREEKKRCEYLHQKLSHIKDLILDYDRSQTPS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggcagcgttgagacaggagcagcggtatggactctcctgtggaaagattaataaaagc
attcccaacaaaaccatctttcacgtcaagctaaccgacacggccatccggacgctggag
gcttataagaatctcaaggggtctttaccaaatcagccagcaatttgcttcaaggggaac
caggggtatatcaagatacctgcttccttggattctcctgatgctttccgtgtcttctcc
ttctatctgtccagtgacagtaaagacaaacctcaggcaagcttcgactgcattcaacag
tatatttctggagatggcagggagcatctggaaagtcagggcagtattcaggacaaaatc
acggtgtgtgccaccgacgattcctatcagatgacccgcgagcgcatgtctcaagtggaa
aaagacatctggagtcgctcagccatcgagatcaaacctggatccacacatcctagtaaa
tgtgtgaagattaagaagaagcagggcttgccgaccagcttagacaacactaacagacat
tcacccagcaacaagaagaacggtacacctagcttggtggccaccaggcccttgaaagaa
cgtgttattcacattctggccttaaagccctacagcaagccagaactactgctctggctg
gagagggagaaagccagtcccaaggacaaggtcgacttgagtgctgtgctggatgaggtg
gctaaactcaatcccaaagacagcagctttacactaaaggatgatttctacagacatgtg
cggagggactggcccggctatgttgaagaagagcggcaactcattcaaagggtgttggca
agaaaactccagcctctcagcagcagcagtagccagttgaaaagtgtccagtccagccat
tcattccacaaaacctcaggggattctccatcccagctcagccctctcaagaatctctcc
atgaaacgcccagtgccttccgaccatccagaaagtcagacgccaaaaaagcaacgttta
ttagatcagaacaagctcttgcagtctccttccaatagacatctcggctcctccatgggc
cgtagctcttctgctcatggaaacacaagtacagctcagcagagccctgacggtctttcc
cagcggcacaagctcggcgagtccaacagcgtgcccaaaccagaaccagcacagcagcca
tcgtccagccccaaacacccaagaactgaaccagacatctgcactgaccagcagctagca
aacggccagcacaaaaagaagtctaagaagcataaagaaaaggagcgggagcgcttaaaa
cctgagtgggtcgagaccagtccggacctcaaacagaaccaggaaaatgtcaaagaccat
gaacgacccaacacacctgtctcccgttcctcgcccgacgagctgcctgactatttatta
aaatacaacactattacagactccgagcagcagaagaggtacaaagaggatttttgtgcg
gagtatgatgagtatagagaccttcatgaacgcatagggaaagtcacagagatatttgtt
cagctgggatccaagataaagacgctgtctcctgggacacacgagtataaggtaatggaa
gttcaaataatggagaagtataggaagtataagaagaagtttccaggctaccgggaagaa
aagaagcgctgtgagtatctccatcagaaactatcgcacatcaaggacctgattctggac
tatgaccgctcacaaacaccctcctag

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