Carassius gibelio (silver crucian carp): 127934377
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Entry
127934377 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127934377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127934377
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127934377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
127934377
NCBI-ProteinID:
XP_052387675
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Position
A18:8753850..8775216
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AA seq
820 aa
AA seq
DB search
MDTEGFGELLQQAEQLAAETDAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGEDALDFSXEVEPSFVSEVRVPGRSALDS
VEAAYSRQIYIFNEKIVNGHLHPNLGNLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVDMQMAFVRQALQFLENSYKNYTLVTVFGNLHQAQLGGVPGTYQLVCSFLNI
KLPTPLPGMQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNRAQHQLGDFKIWFQEYMNSP
DRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLN
QVCFDEEGSSSPQDRMTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAIVFL
FRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNADKVLELMNKLLSPVIAQVSEPQSN
KERLKHMAVAIAERYRTNGIAGEKTVDSTFYLLLDLMTFFDEYHAGHIDRAYDVIERLKL
VPLSQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRAQRTLE
DRDMLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatactgagggctttggggaactcctgcagcaggcagaacagcttgcggcagagacg
gatgccgtgtctgagttgccccatgttgagcgaaacctacaggagatccaacaggcagga
gagcgactacgctcccgcactctcaccagaacctctcaagacacagctgatgtaaaagcc
tccatcctcttgggctctcggggtcttgacatcttccatatctcccagcgtcttgagagt
ctcagtgcagccactacatttgagcctcttgagccagtcaaggacactgatattcagggc
tttctgaagaacgaaagagacaatgcactgctgtcagccatcgaggaatcacgccgcagg
acatttctgctggcggaggagtaccacagagactctatgttggtgcagtgggagcaggtg
aagcagagagtgttgcacaccctgctgggagctggagaggacgcactggacttcagctag
gaagtggagcccagttttgtgagcgaggtcagagttccaggacgcagtgcactagacagt
gtggaagctgcctacagccgacagatctatatcttcaatgagaagatagtaaatgggcat
cttcacccaaacctgggaaatctctgtgcctcagtagccgaaagtctggatgataagaat
gtgtcagacatgtggctcatggtgaagcagatgacagacgttctgttggtgccggcaaag
gacacgctgaagagtcgagtgtctgtagacatgcagatggcctttgtcagacaagccctg
caattcctggagaacagctataaaaattacactctggtcactgtatttgggaatctgcac
caggctcagctgggtggagtacctggcacttatcagctcgtatgcagctttctgaacatc
aagctgccgaccccgctgcctggcatgcaggacggcgaggtggagggacatccagtctgg
gctctgatctatttctgcctgcgttgcggagacctgtctgccgccatgcaggtggtgaat
agggcacagcatcaactgggtgactttaagatctggtttcaggagtacatgaatagcccc
gacagacgtttgtctccagcaacagagaataaactccgacttcattaccggcgtgtgctg
aggaacagtgccgacccctacaagcgtgcagtctactgccttatcggcaaatgcgacatt
ggcgacaatcatggagaggtggccgataagacagaagactacctgtggcttaagctgaat
caagtgtgttttgatgaggaggggagcagttcccctcaggacagaatgactctagcccaa
cttcagaaacagctgctggaagactatggtgagtcccatttctcggccagccaacagcca
ttcctgtacttccaggtgcttttcctgactgcacagtttgaggcggccatagtgttcctt
ttccgagtggagcgtctgcgcagccatgccgttcacgtagctctggtgctgtatgaactc
aaactgctgctcaaatcatcaggccagagtgcacaactcttgagtcaagaagctggagat
cctccaatggtgcgaaggctcaacttcatcaggctgcttatgctctacactcgcaagttt
gagtccacagacccacgagaggccctgcagtatttctacttcctccggaatgagaaggac
agtcaaggagaaaacatgttcatgcgctgtgtcagcgagctagtcatcgagagtcgggag
tttgatatgcttcttggaagacttgaaaaagatggaagcagaaagcccggagtgattgac
aagtttgccggagacacgcgggccatcattaccaaggtggcatcggaggctgagaacaag
gggctgtttgaggaggccgtcaaactgtacgagttagccaagaatgctgataaggttctg
gagctgatgaacaaactgttgagtccagttatcgctcaagtcagcgagccccagtccaac
aaagagcgactcaaacacatggcagtggctattgctgaacggtaccgtactaatggaata
gccggggagaagactgtggacagcaccttctacctgcttctggacctcatgacgttcttt
gatgagtatcacgccggacacatagaccgagcctacgatgtgattgagaggctaaagctg
gttcccttaagtcaggagagcgttgaggaacgggttgcggccttcaggaacttcagcgac
gaggtgagacataatttgtcagaggttctgctggccacgatgaatatcctgttcacacag
tacaagcgtctaaaaggggctgcagcaggcacaccaggaagagctcagcgtaccctagag
gacagagacatgctgctgcgcagtcaagcccgggctctgatcacgtttgcgggaatgatt
ccgtatcggatggctggagataccaatgccagattggttcagatggaggtcctaatgaac
tga
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