Carassius gibelio (silver crucian carp): 127934462
Help
Entry
127934462 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127934462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127934462
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127934462
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127934462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
127934462
NCBI-ProteinID:
XP_052387813
LinkDB
All DBs
Position
A18:20329967..20379630
Genome browser
AA seq
2094 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSPPESRRSNSKASKAP
PSSAVGSARGHASRRNILSLSVGSHSIPDPDLEAAGSSGEQGRREGSSTRALKRSSASEL
NITFSPSPAKRPKAVSSHLFESSSSGPSAPTTSPEVTEPRKAPASVSTKSKKRRLAAEPA
PARALSKKSTSYTGPSGASITPSQKRKKADASSLSSSSPSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSASSSSSSSSSSSAATGANSCAPQGARLKQGKD
QSKVRRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAET
SSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRG
AAESRRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQAAGDESQQLQAAI
EMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVV
VDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQR
NALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENL
LQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETLR
FLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTIE
GAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGT
ARAIQRKPNPLANPNTGGHFEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQK
LPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVTP
DLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGKLGNQTNSSNSEPSRTAGVSGLARVPPKDSVSNNRDKIKAWI
KEQASKFVERYFNSESLDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISTIVSESDV
SSFEIQHSGLVKQLLLYLTSNSERDTIIRDERIKRFLHVFFGCPIPGQEPLGRLDLTENG
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSG
CVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIWY
KPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNLLESYLISGP
PEGITFDDPSMEVVLLLRVLHSISRYWFYLYENAACKEIIPSGEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALV
SQELQRADLGLWRGEEVTLSNPKGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFR
FLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAKSIQHLEDIIRQ
KKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNL
EEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQCFYPEELDQLLCGSKSESWDVKT
LMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTETPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccccacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacatcctctctcta
tccgtgggttcacactcgattccagatccagacttggaagcagcaggttcttcaggcgag
caggggagacgggagggcagcagcacccgtgctctcaaacgcagctccgcttcagagctc
aacattaccttttcacccagcccggccaagcgacccaaagcggtgtccagccaccttttt
gagagttcatccagtgggccatcggcccccacaacctcacctgaagttacagagccgagg
aaggctccagcatctgtcagcaccaagtccaaaaagagaaggttagcagccgagccggct
cccgccagagctctgagcaagaagagcacatcttatacaggccctagtggggcctcgatc
accccctctcaaaagcgcaagaaggcagacgcctcttcattgtcatcctcctctccttca
tccctccccagctctagcagtgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcttcctctgcctcttcctcatcctcctcttcctcttcctcctcg
gctgccacaggcgccaacagctgtgcccctcagggtgcccggctaaaacagggcaaggac
cagagcaaagtccggcggtcacgctctgcatcctccccttctccccgaaggagcagccga
gataaagagcagagcaaggctgctggctcatccaagtttgattggacatcccgcttcaac
tccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgagacc
tcctctaagcctgggccctctggactgcaggctaaactagcaagtttgaggaagtccact
aagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgtcag
aagaccacgggctcttgtgccagcaccagtcggcgaggctcaggcctgggcaagcgcggg
gcagccgaatctcgccgacaggagaaaatggccgactctgacaacaaccaggatggggcc
aattcatcagccgcgcgcacagaggagacaccacaaggggcatcagcgtctagctcagtg
gctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatggga
agactgcaagctctactggaggccaggggccttcctcctcacctgttcggcccatttggg
ccccgtatgtctcagctgtttcataggaccatcgggagtggagctagctcaaaggcacag
cagctgctgcaggggcttcaggctgcaggagacgaatcccagcagctccaggctgcgata
gagatgtgccagctgctagtgatgggcaatgaggagacactgggaggattccccgtcaag
agcgtcgtacctgccctgatcacactgttacagatggagcataattttgatattatgaat
catgcatctcgcgccctcacctacatgatggaggctctgccgcgctcctcggctgtggtg
gtagacgccatccctgtcttcctggaaaagcttcaggtaatccagtttatcgatgtggca
gagcaagccttgaccgccctggaaatgttgtcacggaggcacagcaaagccatcttacag
gctggaggtctggctgactgtttgctgtacttggagttcttcagcatcaacgcgcagagg
aacgcattagccatcgctgctaactgctgccagagcatcacgccggacgagtttcacttc
gtctcggactctctgcccctgctcactcagagactcacacaccaggataaaaaatctgtc
gaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaatctg
ttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggtgctcact
ccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctcgctcatgtgc
tccaactgcccgtgcttggccgtgcagctcatgaaacagaatatagcagagaccctgcgt
ttcctgctctgtggagcatctaatgggagctgtcaagagcagattgaccttgttcccaga
agcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctgccc
agagagggcatctttgcggttgatgccatgctgaagaaaggcagtgcccagaccatagag
ggcgccatctggcagtggagagatgataggggcctgtggcacccatacaaccgcattgac
agccgcatcattgaaactgcacaccagaacggagaagacgagataagtctgtcgacactt
ggccgtgtctacacaatcgacttcaactctatgcagcagataaatgaagacactggcact
gcccgagccattcagagaaaacccaaccctctggccaaccccaacacaggggggcacttt
gaggtgcggcgagaggacgcacgagctcagctgatgaaagaggacccagagctggccaag
tgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagccgggcct
gccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgcagag
ctgcttaaagatgtactgcgcaaccatgctgtgtctagccacatagcttccatgctgtcc
agtcaggacctgaagattgtagtcggctctctgcagatggctgagatcctcatgcagaag
cttccagatgttttcagtgtatatttcaggcgtgaaggtgtaatgcaccaggtaaagaac
ctagccgaatctgaggtgttcctcaccagccctccgaaagcgtgcaccagcggcacagct
agtctttgcaccaccaccatcacaacagcaaccactacagctgcctccaatgtcacaccc
gacttaggctcgcccagtttccagcacagcatggacgactcgctggacctcagtccacag
ggtaggttgagtgacgttctcaaaagaaagcgccttcctaaaagaggaccaaggcgtcca
aagtactccccacccagagatgatgacaaagtggataatcaggctaagagcccaacaacc
acacagtcccccaagtcctctttcctggccagtttaaatcccaagacctggggtaagctg
gggaatcagactaacagctccaactccgagccctcacgcactgcaggggtcagcggtctg
gcacgagtgccgcccaaggactcggtttcaaacaacagggataagataaaggcttggata
aaggaacaagccagcaagtttgtggagcgttactttaattcggagagtctggatggaagc
aaccctgcactgaatgtcctgcaaagactctgcactgccacagaacagctgaacttgcag
gttgacagtggtgtggagtgtctagaggagataagcactattgtatctgaatcagatgtg
tcctcctttgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgacatca
aacagtgaacgggacactatcattagagacgagaggatcaagaggttcctgcatgtgttc
ttcggctgcccgataccagggcaggaacctctggggcgtttggacctgacagagaatggc
ccactgctggcattggtgcacaagatgaacaactgccttagtcagatggaacagttccct
gttaaagtgcatgattttcccagcgggaatggcaacggaagcaggggttcacaagccctc
aagttctttaacacgcatcagctgaagtgccagttgcaaagacacccagactgcaccaat
gtcaagcagtggaagggcgggccggtcaaaatcgaccccttggccctagtacaggctatt
gagagataccttgtggttagagggtatggaaggatcagagaggaggatgaagacagtgat
gatgatggttccgatgatgagattgatgaatctttggctgcccagttcttgaattctggg
tgtgtacgtcacagactgcagttctatataggagagcacctgctgccctacaacatgact
gtttatcaggccgtcaggcagttcagcttacaggccgaggaggagcgagagagcacagat
gatgaagcaaatcctctggggcgggctggcatctggaccaaaacacacactatatggtat
aagccagtcagagaggatgaagagggctgtaaagacgctgttggagggaagaggggtcgt
gcacagacggctcccactaaaacctcccctcgaaatgccaagaaacaggatgaactgtgg
catgagggtgtgtgtcccagtgtgacaaaccttttagagtcatacctcattagtggtcct
ccagagggcatcacttttgatgacccttcaatggaggtggttctgctgctgagggtcctg
cactccatcagtagatactggttctacctgtatgagaatgctgcatgtaaggaaatcatt
cccagtggtgaatttatcaacagtaaactgacagcaaaggccaacagacagctgcaggat
ccgctggtcatcatgacagggaacattcccacctggctcactgagctcggcaaaacctgt
ccattcttcttcccgttcgacacacggcagatgcttttctacgtgactgcatttgaccgc
gatcgcgccatgcagcgtctgctcgacaccaacccagagattaaccagtccgactcacaa
gacagccgcgtcgctcctcgccttgataggaagaagaggacgataaaccgtgatgagctc
ctgaagcaagcagagtcagtaatgcaagatctcgggagttccagagccatgctggaaatt
caatacgagaacgaggtgggaacaggtctcggccctacacaggagttctatgctctggtg
tctcaggagttgcagagggcagatttgggtctttggagaggagaggaagtcactctctcc
aaccctaaagggagtcaggagggtaccaagtatatgttcagttccagagggttgtttgct
gtaccatttggtcgaactaccaagccagctcacatcgccaagatcaaaatgaagttccgt
tttcttgggaaactcatggctaaagcgatcatggacttcagattgttggacttgcctcta
ggcttgccattctataagtggatgctgaggcacgaatcctccatcagctctcatgatctg
gtcaacattgatcctggcgtcgccaaatccatccagcacctggaggacatcatccgccag
aagaagagaatagagcaggaccgatcacatacacgggagaccctacagcaggccttggag
agtctcaacatgaacggctgctcggtggaagatctgggcctggacttcacactgcctgga
ttcccaaacatcgagttgaagaaagggggtaaagacgtgccagtcaccattcacaacctg
gaggaatacctcagattggtggtctactggacgctcaatgaaggtgtgtctcggcagttt
gagtcgtttagggaaggatttgagtcggtcttccctctgcaacatctgcagtgcttctat
cctgaagagctggatcagttgttatgtggcagtaagtcagagtcctgggatgtgaagaca
ctaatggagtgctgcagaccggaccacggctacacacacgacagccgtgcagtgcggttc
ctgtttgaggtgctgagcagttttgatgcagagcagcagagacttttcctgcagtttgtc
acgggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctcactatc
gttcggaagacgttcgagtcgacagagaccccggacgacttcctcccgtcggtgatgacg
tgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactg
ttgattgctgcgcgcgagggccagcagtctttccatctgtcctga
DBGET
integrated database retrieval system
