Carassius gibelio (silver crucian carp): 127934521
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Entry
127934521 CDS
T08819
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04144
Endocytosis
cgib04517
IgSF CAM signaling
cgib04520
Adherens junction
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127934521
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127934521
09144 Cellular community - eukaryotes
04520 Adherens junction
127934521
04530 Tight junction
127934521
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127934521
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127934521
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127934521
NCBI-ProteinID:
XP_052387926
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All DBs
Position
A2:25248170..25342112
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AA seq
1350 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHSLVQQAAMRYRRAIAKDEEYWVQVYRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHVGGDGTSASSTGTQSPELFSGEPSTSTPLSAFQPY
LPHSEIEVTTSTLRTNMPLHVRRSSDPALLNLTAMSFSEPGSQPEEPSRKNPTRWSTTAG
FLKPRFSSGTNSLERKGRGVDTYRSLPRDAGQWSNQKEFQREKARSSLSANHPMVDRWLE
RQEQDEEENGRIEPVGRADICLEHMGVRSLNDIVKLVEVSNDGGPLGIHVVPFSGRDRRT
LGLLVKRLEHGGKADVQGLFQENDCIIRINNGDLRNVRFEQAQNMFRQAMHSPVILFHVV
PTTMRSLYEQISHNEHNPRVNIDLSGRFSPDSLTNDPVGLDHAAHRLAQHMPHPPNNHLD
TSSPIRHPVGSSGKPPSGHASSPQRGLSPAPTTGFTKKVGRRLGIQLRKGPEGLGFSITS
RDVPLGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRGQEEVVSLLRATPMG
GTVSLLVMRQEESFLPREMNTEPAMQNTREWKVEDEELVLTPDGTREFLTLEVPLSDSGS
AGLGVSVKGNRSKESHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDA
METLRKSMSTEGNKRGMIQLIVARRINKRLEGESRCSPRGLERTLSPSPDDHERRISHSL
YGIEGLDDNLRPHANTSPHKMNHYQLSPTVNMPQDDTVIIEDDGPHVLPAQLSDQSSSSS
HEDMGFAVETPPPPPWNQELPDSSSSANDEGAFQREGFGRQSMSEKRTKQYGDASQLDII
KTRKSKSMDLVADEINLTHYTENHPGSSSHDVGPSLGLKKSSSLESLQTAVAEVTLNGDM
PFHRPRPRIIRGRGCNESFRAAIDKSYDRPAANEDEEECMDTLEEDNEGSSRSGRDSVST
VADLTPLPVTEQQLINGSQPQNDKKKEKGGKDKKKPEKEKGKTKKGMLKGLGEMFRFGKN
RKDERMDGPKWKAEETHASEEETRRMRQEQERIQAKTREIRQRQARERDYAEIQDFSRST
LTSLPSEEPSYAGIGSLEHSGYHRIHTPPDSPYTHKQNAHNGHPSTSDRLTLSNHDRIQR
LRQEFQQVRQEETEPDDRHRAYSLEQHWSNCSSQTSSGRHSVSVEVQLQRQEARDAFTHA
QRQYSSLPRHPRKTPAPASEREWERMCPGGDGFQAAKDSGRYSSYQGSRSVPRTVPRPGC
RNGLSAPPGAGGSSVGGGYNARVLLEAQELLRQEQRRREQEVKGRGPSMRLDYESQDSKG
RHRQDAPLSPSQVVRLSRIHTPEKTRPFLS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaagaactcgggtcgtggttccgtgcggagatggcaac
attaaagtgcactcgctcgtccagcaggccgcgatgcggtacaggagagcgatcgccaag
gatgaagagtactgggttcaggtgtaccggctggaacacggcgatggaggaattcttgac
ctggatgatgttctgtgtgatgtggccgatgacaaagacagattggtggcagtgtatgat
gaacaggagcctcatgttggaggtgacggcaccagcgcgagctccacaggcacacagtcg
ccggagctcttctctggagagccgtccacctccaccccactgtctgccttccagccgtac
ctgccccacagcgagatagaggtcaccacatccacgcttcgaaccaacatgcctttgcat
gtccgtcgcagtagtgatccggcattgttgaacctgacagcgatgtcattctctgagcct
ggttcacaacccgaagaaccttccagaaaaaatcctacacgctggtccacaaccgccggc
ttcctgaaaccacgtttctcttccggcaccaacagtctggagaggaagggccgaggtgtc
gacacatatcgtagtcttcctcgtgatgcagggcagtggtccaatcagaaagagtttcag
cgtgagaaggcccgttcctcactcagcgccaatcatcccatggtggaccgctggctggag
cgacaggaacaggatgaggaggaaaacggtaggatagagccagtgggacgtgcggatata
tgtttagagcacatgggagtgagatcgctcaatgatattgtgaaattggtggaagtgtcc
aatgacggaggtccactcggtatccatgttgtgcctttcagcggacgagaccgcaggacg
ttgggtctgctggtgaagcgtttggagcatggagggaaggctgacgtccagggtttgttt
caggaaaatgactgcatcattcggatcaacaatggagatctgcggaatgtccgatttgag
caagctcagaacatgtttcgtcaggcaatgcattctcctgtcatcttgttccatgtggtg
ccgaccaccatgagatccctgtatgagcagatatcccataatgaacacaaccccagagtg
aacattgacctttctggacgtttcagccctgactccctcacaaatgacccggtcggcctg
gatcacgctgctcaccgattggcccagcacatgccacacccaccaaataaccatttggat
accagctctcccatccgtcatcctgttggctcatcagggaaacctccatcaggccacgcc
tcctctccccaaagaggattaagccccgcccccacaactggctttaccaagaaggttggg
cggagacttggaatccagcttagaaaagggcctgaaggtctggggttcagcatcacatca
agggacgtccctcttggaggctccgcccctatttacgtgaagaacattctgccaagagga
gctgccatacaggacgggagactgaaagcaggggatagattgctagaggtcaatggggtg
gatcttaatgggcgtggtcaggaggaggtggtttctctgctgagggcgacgcccatgggc
gggactgtgagtcttctggtaatgagacaggaagagtcctttctacccagagagatgaac
acagaaccagcaatgcagaacacacgagaatggaaggtagaagatgaggagttggtccta
acaccagacgggacacgtgagttcctgacgttggaagtgcctctgagtgattctggctcg
gcgggtttaggagtcagtgtcaagggtaataggtcaaaggagagccatgctgacctgggc
atctttgtcaagtctattatcaatggaggagcagcatgcaaggatggaaggctgcgagtc
aacgatcagctaatcgcagtcaatggggagtcgttgttagggaagacaaaccaggacgcc
atggaaacactgcgcaagtccatgtcaacggagggcaacaagcgagggatgattcagctg
attgtggcaagacgaatcaacaaacgccttgagggggagagccgatgcagtccccgaggt
ttagagcggaccctgagcccgtctcctgatgaccacgagcgacggatctcacactcgctg
tatggaatcgaggggcttgatgacaatcttaggccacatgccaacacaagtcctcataaa
atgaatcattatcagctctcgccgacggtcaacatgcctcaggatgacacagtcattatt
gaagacgacgggccacatgttctccccgcccagctgtctgaccaatcgtcatccagttct
cacgaagacatgggtttcgctgtggagactccgccaccaccaccctggaaccaagaactt
ccagacagctcttccagtgctaatgatgagggggcgtttcagagggaaggctttggcagg
caaagcatgtctgaaaaacgcaccaagcagtatggagacgcaagccaactcgatatcatc
aagacccgcaagtccaagagcatggacctagtggctgatgagattaacctcacacactac
acagaaaaccacccaggctcttcctcacatgatgttggcccgtctctcggcctaaagaag
tccagctctctggaaagtttacagactgccgtcgctgaggtgactctcaacggcgacatg
ccttttcaccggccacgcccacgcatcatacgggggcggggctgcaacgagagcttccga
gccgcaattgacaaatcgtacgacaggccagcagcaaatgaggatgaagaggagtgcatg
gacacattggaggaggacaatgaaggaagctctcgatcagggcgggattccgtttccacg
gtagctgatctcactccgcttcccgtcaccgagcaacagcttatcaatggcagtcagcct
caaaacgacaagaagaaagaaaaaggggggaaggacaaaaagaagccagagaaagagaag
ggtaaaacaaagaaaggaatgctcaagggtcttggagagatgttcaggttcgggaagaac
cgtaaggacgagcgtatggatggtccaaagtggaaggcagaggaaactcatgcatcggag
gaagagacgcgcagaatgagacaagaacaagagaggatccaggctaaaacacgagagatt
cgtcagcgccaggccagagagagagactatgctgagatccaggacttcagtcggtccacc
ctgacctcacttccttctgaggagccctcgtatgctggcatcggctcgctggaacacagc
gggtaccatcggatccacacgcctccggactcaccatacacacataaacagaacgcccac
aacggacacccctctacatcagacaggctgacactcagcaaccacgaccgaatccagcgc
ttacgccaggagttccagcaggtcaggcaggaagagacggagccagatgatcgccaccgt
gcctacagcttggagcagcactggtccaactgcagctcacagacatcatctggccgacac
tccgtgtctgtggaggtgcagttacagagacaggaagccagagatgctttcacacatgct
cagagacagtacagctctctgccacgccaccctcgtaagacacccgccccagcctcagag
agggagtgggagagaatgtgtccaggtggagatggtttccaggcagccaaagacagtggc
cgttactccagctaccagggatctcgttccgtcccgcggaccgttcctcgtcctgggtgc
aggaatggcctctctgctcccccaggagctggtggttcctcggtgggtggcggctacaat
gcacgcgtccttctggaggcccaggagctcctgcgacaagaacagagacgcagggagcag
gaagtgaaaggaagaggcccatcaatgcggttggactacgaatcccaggattccaaaggg
cgccacagacaggacgccccactttccccttcccaggttgtccgactcagccgcatacac
acacctgagaaaacgcgcccatttttgtcataa
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