KEGG   Carassius gibelio (silver crucian carp): 127934571
Entry
127934571         CDS       T08819                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
cgib04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127934571
  09124 Replication and repair
   03420 Nucleotide excision repair
    127934571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127934571
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127934571
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     127934571
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127934571
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127934571
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 127934571
NCBI-ProteinID: XP_052388009
LinkDB
Position
A18:26693118..26722973
AA seq 1140 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVQFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSESGRN
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLIQITSVSVRLVT
QDSKALVSEWKEPQGRNISVASCNSTQVVLAVGRVLYYLQILTGELKQISSTEMEHEVAC
LDITPLGESAGESSICAVGLWTDISARLLKLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDIQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSQCFGVLSSRVEMQDASGTTAAVRSSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLQNEYALSMVSCKLGRDPAVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFSGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKQMEGSFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFSHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSESWYSLLLDLQIRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRVKMQEVVSTLQMDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcctacaactacgtggtgacggcgcagaagccgacggcggtgaacgcctgtatcacg
ggtcacttcacttctgcggaggatctgaacctgctgatcgccaagaacacgcgtctggag
atctatgtggtcactgctgagggtctgcggccggtcaaagaggtcggcatgtacggcaag
atcgctgtcatggagctcttcagacccaagggtgagagcaaagatcttctgttcattctg
accgctaaatacaacgcctgtatcctggagtacaagcagaacggagacagcatcgacatc
atcacccgcgctcacggaaacgtgcaggatcggatcggccgtccgtctgagaccgggatc
atcgggatcgtggatccggagtgtcgtatgatcggcttgcggctgtacgatgggctgttt
aaggtcattcctctggaccgtgataaccgcgagctcaaagccttcaacattcgtctggag
gagctgcaggtcatagatgtccagttcctgtatggctgccaggcgcccaccgtctgcttc
atatatcaggatcctcagggtcggcacgtcaagacatacgaggtttctctcagagagaag
gagttcaacaaaggaccctggaagcaggagaacgtggaagctgaagcatcgatggtcatc
ccagtcccagagccgtttggaggagctataatcatcggacaggagtccatcacttatcac
aacggagacaaatacttagccatcgctcctccaactatcaagcaaagcaccatcgtgtgt
cataaccgcgtggatccgaacggctcgcggtacctgctgggagacatggagggacgactc
ttcatgctgctgttggagaaagaggagctgatggacggagctgtggtgctcaaagacctg
cacgtggagctgctgggagagacctccatcgccgagtgtctgacgtatctggacaacggt
gtggtgtttgtgggctccagacttggagattctcaactagttaagctgaatgtggacagt
aatgaccagggttcgtatgtggctgtaatggagaccttcactaacctggggccgatagtg
gacatgtgtgtggtggacctggagagacaaggacagggtcagctggtgacgtgctccgga
gcgtttaaggaaggctctctccggatcattcggaatggcatcgggatccatgagcacgcc
agcatcgacctgcccggcatcaaaggtctgtggcctctccgctccgagtcgggcagaaac
actgatgacatgctggttctgtcttttgtgggtcagaccagggtgctgatgctgagtgga
gaggaggtggaggagacggagctgccggggtttgtggataatcagcagacgttcttctgt
gggaatgtagcgcatcagcagctcatacagatcacgtcggtgtctgtgaggctggtcact
caggacagcaaggctctggtgagcgagtggaaggagcctcagggcaggaacatcagcgtg
gcgtcctgcaacagcactcaggtggttctggctgtgggtcgagtgctgtattaccttcag
atcctcacaggagaactcaaacagatcagctctacagagatggagcatgaggtggcgtgt
ctggacatcactcctctgggcgagagcgcaggagaatccagcatctgtgctgtgggactc
tggaccgacatctcagcacgcctgctcaagttaccctgcttcagcccgctgcacaaagag
atgctgggcggagagatcatccctcgctccatcctcatgaccacgtttgagggcagtcat
tacctgctgtgtgcgctgggagacggggcgcttttctatttcggactggacattcagaca
ggtgttttgagtgagcgtaagaaggtgactctgggcactcagcccacggttctgcgcacc
ttccgctcgctctccacctccaatgtgttcgcctgctccgaccggcccaccgtcatctac
tccagcaaccacaaactggtcttctctaacgtcaacctgaaggaggtcaactacatgtgc
ccgctcaactccgagggataccccgacagtctggctctggccaacaacagcacactgacc
atcggcaccatcgacgagatccagaagctccacatcagaaccgttcctctctacgagtcg
cccaagcggatctgctatcaggaagtgtctcagtgtttcggagttttgtccagtagagta
gagatgcaggacgccagcgggacaacagcagccgtgcggtccagcgccagcacacaggcg
ctctccagcagtgtcagctccagtaagctgtttcccagcagcacttctcctcatgagacg
tcgttcggagaggaggtggaggtgcacagtctgctggtggtggatcagcacacgtttgag
gtgctgcacgcgcatcagttcctgcagaatgagtatgcactgagtatggtgtcctgtaag
ctgggcagagatcctgcggtctacttcatcgtcggcacggccatggtgtatccggaggag
gcggagcctaaacagggccgcatcatcgtctttcactacacagacggcaaactgcagacg
gtggcagagaaggaagttaaaggtgcggtttactccatggtggagtttagtggtaaactg
ctggccagcatcaacagcaccgtgcgtctgtacgagtggacggcagagaaggagctgagg
accgagtgcaatcactataataacatcatggccctgtatctgaagactaaaggagacttc
atcctggtgggagacctgatgcgctccgtgctgctgctggcctacaaacagatggagggc
agcttcgaggagattgctcgtgacttcaatcctaactggatgagtgctgttgaaatcctg
gatgatgacaacttcctcggagcggagaacgctttcaatctgttcgtctgccagaaggac
agcgcggcgacgacagacgaggagcgacagcacctgcaggaggtgggtctgtttcacctg
ggagagttcgtcaatgtgttctcacacggttctctggtgctgcagaatctgggcgagagc
tcgactcccacacagggctcggtgctgttcggcacggtcaacggcatgatcggtttggtg
acgtcgctgtcggagagctggtacagtttactgctggatctacagatccgactcaacaaa
gtcatcaagagcgtcggcaagatcgagcacagcttctggaggtcgttccacaccgagcgt
aagactgagcaggccacgggcttcatcgacggagatctgatcgagagcttcctggatctg
ggtcgtgtgaagatgcaggaggtggtcagcacgctgcagatggatgacggcagcgggatg
aagcgcgaggctacggtggacgaagtgattaaaatcgtggaggagctgacacggatccac
taa

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