Carassius gibelio (silver crucian carp): 127934885
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Entry
127934885 CDS
T08819
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127934885
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
EARP complex
127934885
Endosome - Golgi transport
Tethering complex
GARP complex
127934885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
COG6_N
CoV_NSP7
DUF5740
MscS_porin
DUF1664
Motif
Other DBs
NCBI-GeneID:
127934885
NCBI-ProteinID:
XP_052388384
LinkDB
All DBs
Position
A19:complement(3132022..3156237)
Genome browser
AA seq
711 aa
AA seq
DB search
MAETLLTGADSAEYLQDEKSDFDVAPALNLGDLDITTDEFILDEVDIHIQANLEDDLVKE
ALKTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQISACDSILERMEGMLSS
FQSDLSSISSEIQTLQQQSVSMNLRLKNRQAVRSHLSQLVDELVVPSTMISVILDSPVTE
QEFLEQLHELNSKINYAKELSFRETLACSDVQDIVDRLKIKAVSKIREFILQKIYSFRKP
MTNYQIPQNTLLKYRFFYQFLLANERTVAKEVRDEYVDTMSKIYFSYFKSYSGRLLKVQY
EDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTVGPRGAVLSPAELEGPILIPHTAQRG
DTRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSIMGKTLSMFLKSLST
YLSDCYDSIAVFLCIHIILRFRAITVKRNIPALDKYWEAVLELLWPRFELILEMNIQSIR
NTDPQKLGVLDTRPHYITRRYAEFSSAVVSINQTFPNERTHTLLGQLQVEVENFVLKMAA
EFPSRRDQLIFLINNYDMMLGVLMERAADDSKEVEGFQQLLLARTQEFIEEILSPPFGGM
IAFVKESEALMEKGQLDKLRNDEARITQLVRGFSSSWKQSVEALSQDVMRSFTNFKNGTS
IIQGALTQLIQYYHGFHKVLSQPTFRSLAVRSELINIHHLMVEVKKHKPNF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgctgctgaccggcgcggactctgcggagtatttacaggacgagaagtct
gactttgatgtggctcctgcactgaatctgggggatctggacatcaccacagatgagttc
attctggacgaggtggacattcacattcaagcgaatctggaggatgatctggtgaaggag
gcactcaagacgggtgtggatctgaggcagtactccaaacaggtggagacggagctgcag
cgcatcgaacaagcatcaatcaaggactatatcaaagagagtcagaatatagcctcttta
cacaaccagatctcagcctgtgactccatactggagcgcatggagggcatgttgagcagc
ttccagagcgacctgtcgtccatcagcagtgagatccagacgctccagcagcagtcggtc
agcatgaacctgaggctgaagaaccggcaggccgtgcgcagtcatctcagccagctggtg
gatgagctggtcgtccccagcaccatgatctctgtgattctggacagtcctgtgacggag
caggagtttctggagcagcttcacgagctcaacagcaagatcaactatgctaaagagctc
agcttcagagaaaccctcgcctgctccgacgtacaggacatcgtagatcgcctcaaaatt
aaagccgtctcaaagatccgggagttcatcctgcagaagatctactccttcagaaagccc
atgaccaactaccagatccctcagaacacgctgctgaagtacaggtttttctatcagttc
ctgttagccaatgagaggaccgttgctaaggaggtccgggacgagtatgtggacaccatg
agcaagatctacttcagttacttcaagtcctacagtggcagactgctgaaagtccagtat
gaagacgttgcagataaggatgatctgatgggagtggaggacacagccaaaaaagggttt
ttctccaagccttctctcaagagtaggaacactatttttactgtgggcccgaggggggca
gtgctgagtcctgcagagctggaggggcccatactgatcccacacactgctcagagagga
gacaccagatacccgtacgaaacgctcttccgcagtcagcactacgctctgctggacaac
ggctgtcgagagttcctcttcctgtccgacttcttcatggtggccggaaactctgctctg
gatttgttcaacagcattatgggaaaaacactcagcatgttcctgaagagtctgtccacg
tacctgtcagactgttacgacagtattgccgtgtttctctgcattcacatcattctgcgc
ttcagagccatcacagtcaagaggaacatccccgcgctcgacaagtactgggaggctgtg
ctggagctgctgtggcccagatttgagctgattttggagatgaacatccagagcattcga
aacactgatcctcagaaacttggtgtcctggacaccagaccacactacatcacacgccgg
tatgctgagttctcctctgctgttgttagcataaaccaaacctttcccaacgagaggacc
catactcttctgggacagctgcaggtggaggtggagaactttgtgctgaagatggcggct
gagtttccctctagacgagaccagctcatcttcctcatcaacaactacgacatgatgctc
ggcgtgctcatggagagagcggcggacgacagtaaagaggtggagggcttccagcagctg
ctgctggccagaacacaggagtttatagaggagattctttcacctccgtttggaggcatg
attgcgtttgtgaaggagagcgaggcactaatggagaaagggcagctggacaaactccga
aatgatgaagctcgtatcacgcagctggtgcggggtttctccagctcgtggaagcagtcg
gtggaggccttgagtcaagacgtcatgcgctccttcaccaacttcaagaacggaaccagc
atcattcagggagcgctgacccagctcatccagtactatcatggtttccacaaggtcctc
tcgcagcccacgttccgtagtctggcagtgcgctccgagctcataaacatccatcatctg
atggtggaagtcaagaaacacaagccaaacttctga
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integrated database retrieval system
