Carassius gibelio (silver crucian carp): 127934889
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Entry
127934889 CDS
T08819
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127934889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127934889
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127934889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Vps41
eIF2A
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_VPS8
DUF7165
KNTC1_N
Beta-prop_TEP1_C
SMAP
Motif
Other DBs
NCBI-GeneID:
127934889
NCBI-ProteinID:
XP_052388393
LinkDB
All DBs
Position
A19:complement(3515137..3536555)
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AA seq
515 aa
AA seq
DB search
MDSSGSSARKQRKTVKRPPSEDASVAEQRLKQKKHAALCATLGGEDASVRLLEELVFGAE
EQLSERLEQIPQDSRVFLEDEDGSEDSGSEGPARPIIRSAVWEDEDDQLEEEVDMTHRFR
RDFKKSEAESKMSKQRLQQRLKEQFQKAMGGTPSWAEETTDRPRRDAEDEDEDEELLRRT
GDFISSSHSLPKGVIKIKKCLNANSECPGADQLSSVQFHPSAQILMTAGLDHSISLFQVD
GKNNPKIQTIHLENYPVNKASFSADGEHIVATGLRNKLFYIYDMMEGKVIPVSSVRGLNE
QRVSDFQVSPDGKYLLLSGSSGYLHLMTTKTREVVRSMKMNGSVCAAAFTPDSSKIFANS
QEGEVFIWDVQSSKCLKKFADDGCVRGTSLALSRDGLYLACGSQSGVVNIYSQKDCLHTL
EPRPLKAVMNLVTPATSLSFNSSSEILAIASRADDEANRLVHLPSFTVFSNFPRFQKKTI
FRAHCLDFSPQSGFYTVANNKGSALLFRLLHYTDF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtctggatcttccgctagaaaacagagaaagactgtgaaaaggccgccgagc
gaggatgcgagcgtcgcggagcagcgtctgaagcagaagaagcacgcggcgctgtgcgcg
acgctcggcggggaggacgcgtccgtcagactgctggaggaactggtgttcggcgcggag
gagcagctgagcgagcgtctggagcagataccgcaggacagccgtgtgttcctggaggat
gaggacggctctgaggacagcggctccgagggtccggcgcggcccatcatcaggagcgct
gtgtgggaggatgaggatgatcagctggaggaagaggttgacatgacacaccggtttcgc
agagactttaaaaagagtgaggcagagagtaagatgagcaagcagaggctacagcagcgc
ttaaaggagcagtttcagaaggccatgggcggcacacccagctgggcagaggagaccacg
gacagaccgaggagagacgctgaggacgaggacgaggatgaagagctgctgcgcaggact
ggggacttcatcagctcgtctcacagtctgcccaagggagtcattaagataaagaagtgc
ctgaatgccaacagtgagtgtcctggagctgatcagctgagctccgtgcagtttcacccg
tctgctcagatcctgatgaccgcaggcctggatcactccatatcactctttcaggtggac
ggcaagaacaacccaaagatccagaccatccatctggagaattatccagtgaacaaggct
tcgttcagtgctgatggggagcatatagtggccaccggattgaggaacaagctcttctac
atctatgacatgatggaaggaaaagtgatcccagtgtctagtgtcagaggtctgaatgag
cagagggtgtcagacttccaggtttctccagatgggaagtatcttctcctctctggttct
tcaggatatctccatctgatgaccacaaagaccagggaagtggtccggagcatgaagatg
aacggcagtgtgtgcgctgcagccttcacccccgacagcagcaagatcttcgccaactcc
caggaaggcgaggtgttcatctgggatgtgcagagcagtaaatgtctgaagaagtttgcg
gatgacggctgtgtcagaggaacgtctcttgctctgtcccgggacggcctgtatctggcc
tgtgggtctcagagcggcgtggtgaacatctactctcagaaggactgtctgcacacactg
gagcccaggcctctgaaggccgtcatgaacctggtgaccccagccacctctctgagtttc
aacagctcctctgagatcctggccatcgcctccagagcggacgacgaggccaaccggctg
gtccatcttccgagtttcacagtgttctccaactttccacgattccaaaagaagacgata
tttcgcgcccattgtctggatttctccccacagagtggattctacaccgtggccaataac
aaaggctctgctctgctcttcaggcttctgcattacactgacttctag
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