Carassius gibelio (silver crucian carp): 127934922
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Entry
127934922 CDS
T08819
Name
(RefSeq) DNA-binding protein SATB1-like isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127934922
03036 Chromosome and associated proteins [BR:
cgib03036
]
127934922
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
127934922
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127934922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
HTH_3
TetR_C_37
Motif
Other DBs
NCBI-GeneID:
127934922
NCBI-ProteinID:
XP_052388435
LinkDB
All DBs
Position
A19:complement(20183659..20193041)
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AA seq
733 aa
AA seq
DB search
MMDHLATTSGTQGPIRCEPSYPSCKMARMENSRDLPVPGVTPVTSKQTSLHTNRRKASLL
PVFCMVEHNDVPPSERKRSEHAEFVLLETDLLFSQITEAALQELGYTHTAAALATGQVQV
GHWNPVSLSTVTDTSDATVGDMLQDLYHVITLRIKLHSVSKLEDLPAEQWTHSTIRNALK
ELLKEMNQSTLAKECPLSQSMISSVVNGTYYASISAARCQEFGEWYKHYKRAKSMMGEMS
RQCNQPSSSSQPTMYQQPMEGSGAESCGVVQMQAGMPGLVMAQLLSQQHAMSQLLTHAHT
HSHGPHPAPLRTPPKCSVSPTTVPQCPSPVADVSPEIYLWVREELKRAGVSQAVFARVAI
NRTQGLLSEILRKEEDPRCASQSLLVNLRAMQSFLQLPQSQRDSIYLEERERYLNSTYNT
NTSSPLPIQAKLSPLSKDIVVKVECDDSGINYGIYDEIQQEMRRAKVSQALFAKVSAAKS
QGWLCELLRWKEEPSPQNRTLWENLSLIRQFLNLSQSERDVIYDQESNTGQTFYSEKHTR
PLTEQLQVMPQHMVPLKQHQQLHQIPPQHHQHFLQQHLITGCPKDSHMGSDIGGRSLPPE
AHAVLQSFIQEVGLHPDQEDIHTLSAQLGVAKEAVLSFFSGHNWLRQEEQDNRGEGEIEE
REDDYMEAEEECRSTVENDEETNANMMTGKQDGAVEQNASTQTRFIITIKKEEQLPCKEE
RDDSPAYCQFINS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatttggcaactactagtggcacccagggacctatcaggtgtgaaccctct
tacccttcatgtaaaatggcccgtatggagaattcaagagatctgcctgtacctggagtc
actcctgtgacctccaaacaaacatcattacacactaacaggaggaaagccagtctgctt
cctgtgttctgtatggtggagcacaatgatgtcccgccctcagagaggaagaggtcagag
catgcagaatttgtgctgttggaaacagacctgctgttcagccagattacagaggccgca
ctgcaagagctgggatacacacacaccgcagcagctctggccacaggtcaggttcaagtt
ggccattggaacccagtgtccctgtccacagtgacagacacctctgacgcaacagtagga
gacatgcttcaagatctttaccatgtcatcaccttaagaataaagctacacagtgtttct
aaactagaggacttgcctgctgagcagtggactcattccaccatcagaaatgccctgaag
gaactgctaaaagagatgaatcagagcacactggctaaagagtgtccattatctcagagc
atgatttcgtcagtagtgaacggcacttactatgccagcatctctgctgcgagatgtcag
gagttcggcgagtggtacaaacactacaagagggccaaatctatgatgggtgaaatgagc
aggcaatgcaaccaaccctcatcctccagccagcccaccatgtaccagcagccaatggaa
ggcagtggggcggagtcatgtggtgttgtccagatgcaggctggaatgccaggtctggtg
atggctcagctcctctcacagcagcacgccatgtctcaacttctcacacacgctcacacg
cactcgcacggacctcatcctgcgccactaaggactcctcccaaatgcagtgtttcccca
accacagtacctcaatgtccctcacctgtcgccgacgtgtcacctgaaatttacctctgg
gtgcgtgaggagctgaagagggcgggggtttcccaagcagtgtttgcacgagtggccatt
aacaggactcagggcttgctgtcagagatcttgcgcaaggaagaggacccacggtgcgca
tctcagtctcttttagtgaaccttagggccatgcagagcttcctgcaactcccgcagagc
cagagagactccatttatctggaggaaagagagcgttacctcaactctacctacaacacc
aataccagctcacctctgcccattcaggcaaaactttcacctctttccaaggacattgta
gtcaaagtggaatgcgatgattctggaataaattatggcatctatgatgaaatacagcag
gaaatgagacgagcaaaagtgtcacaggccttgtttgcaaaagtctctgcagcaaagagt
cagggctggctgtgtgagctcctgcgctggaaggaggagccatcgcctcagaatcgtaca
ctgtgggaaaatctgtctctgatacgccagttcctaaatctcagccaatccgagcgagat
gttatatatgaccaggagagcaataccgggcagacgttctactctgaaaaacacacaaga
ccactgactgaacaactacaagtgatgccacagcatatggtgcctctaaaacagcaccaa
caactacaccaaattccacctcagcatcatcaacacttcctccagcagcatctcatcact
ggatgtcccaaagactctcacatgggctcagatattggaggcaggtctttaccaccagaa
gcccatgcagttctgcagagtttcattcaggaagtaggactacatccagatcaagaggac
attcatacgctgtctgctcaactgggagtagccaaagaggctgttcttagctttttcagt
ggtcacaactggcttcgacaggaagaacaggacaacagaggagaaggagagattgaggaa
agggaagacgattacatggaggcagaggaggaatgcaggagtacagtggaaaatgatgag
gagacaaatgcaaacatgatgacagggaaacaagatggtgcggtagagcagaatgcatct
acacaaactcgctttatcattactattaaaaaagaggagcagcttccatgtaaggaggag
cgtgatgatagccccgcttactgccaattcataaactcctaa
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