Carassius gibelio (silver crucian carp): 127934938
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Entry
127934938 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127934938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127934938
03021 Transcription machinery [BR:
cgib03021
]
127934938
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127934938
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127934938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
127934938
NCBI-ProteinID:
XP_052388471
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All DBs
Position
A19:complement(25086610..25136962)
Genome browser
AA seq
702 aa
AA seq
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MFVPLPVPLVFQRTAPDFSAWRLKSPLPLRSGNSVDIRMSKAVEDDKMGTELPVDSTDSE
RNSPEASDQTQPIKTSPFCLSPAPSNTKVKAEEAAEMISVHAPPPPPAQPALPHTQLMLA
GSQLAGLAALLPAQQQLLLQQAQAQLLAAAMQQSNAAHAAHAAAAANQQHQTQQQQANQA
AAQAQSQAKPEQAPPPLLSQPIQLTAQALCLSLKDIQQFLQLQQLVLMPGHPLQSPAQFL
LPQAQAQQGQQGLLSTQNLIPLPQQSPGSLLTSPSRLGLQAQHHLDDRLWSLQREKSVET
AVSSAPSSAQPMSSISTVTAHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLY
GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAIDNMLPSPSSLSSPLLGFEG
LSGRRRKKRTSIETNVRIALERNFISNQKPTSEEILLMAEQLSMEKEVIRVWFCNRRQKE
KRINPSSATPPLPNHHPASTHKPLCYSPHMMSSQGLAQVVTSLSTTAVSPTPSVACPLNP
SGHAAMGSAPSSVTPPPLSTVSPTPPSLSSPGLNTGNTMMGVSTGMNQALISSNPLATMQ
ALAASGGQMSISALEGSGQMFLGGAGGPGAGLRQSLFLNRPTLLPLARSAGMGLVGTPRA
SPLPGASGTSPDSCSVSPCSSPASFCSLGEASPPPLGGAMAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttggtgtttcagagaaccgctcctgatttcagcgcc
tggcgactcaagtctccgctgcctctgcgctccgggaactccgtagatatcaggatgtct
aaagccgtcgaggatgacaagatggggactgagcttccagtggacagtacagactctgag
aggaacagtccagaagccagcgatcagacccagccaattaaaactagtcctttctgcctg
tctcctgcacccagcaacacaaaggttaaagctgaggaggcagctgagatgatcagtgtt
cacgctcctccacctcctccagctcagccagctctgccacacacacaactcatgctggcc
ggcagtcagctcgcagggcttgccgctctcctccctgcgcagcagcagctgttgttgcag
caggctcaagcgcagctgttagcagcagccatgcagcagtcaaacgctgcacatgcggcc
cacgcagctgcggcagccaatcagcagcatcagacacaacagcagcaggccaatcaggca
gcagcacaagcccagtctcaagccaaacctgagcaagctccgcctccgcttctgtcacag
cctatccagctcactgcccaggctctctgtctctctctgaaggacattcagcagtttctg
cagttacagcagctggtcctgatgccaggtcatcctctacagtctcctgctcagttcctg
cttcctcaagcccaggctcagcaggggcagcaaggtttgctttcgacacaaaatttgatt
ccactacctcagcaaagcccagggagtctcctgacctcgccatctagactgggccttcaa
gcacagcatcatcttgacgacaggctgtggtcattgcagagggagaagagcgtggagacc
gctgtgagctccgccccctcctcagcacagccaatgagctccatttctacggtgacagct
cacgcagaggagcccagtgatctggaggagctcgaacaattcgcaagaaccttcaaacag
aggagaattaaactgggcttcacacagggggatgtgggtatggccatgggtaaactgtac
ggcaatgacttcagtcagaccaccatctctcgcttcgaggctctcaacctcagctttaag
aacatgtgcaagctcaaacccttgctggagaaatggctgagcgacgcagaaaccatggcg
atagacaacatgctgccgagccccagttctctgtcctcgcctctactgggcttcgaaggc
ttgtctggacgccgccgaaagaaacgcaccagcatcgagaccaacgtccgcatagccctg
gagcgcaacttcatctcgaaccagaagcctacctctgaagaaatcctgttgatggccgag
cagctcagcatggagaaagaggttatccgagtctggttctgcaaccgacggcagaaagag
aagcgtataaacccctccagcgccacccctcctctgcccaaccatcatccagcttcaacg
cacaaaccgctctgctacagcccgcacatgatgtccagtcagggactggctcaggttgtt
accagtctcagcacaaccgccgtcagtcccacaccttctgtggcctgccctctcaacccc
agtggacatgcagcaatgggctccgccccttcctctgtgactccgcctcctctcagcaca
gtcagcccgactccacccagtctcagcagccctggtctgaacacagggaacacaatgatg
ggtgtaagcacaggaatgaaccaggccctcatcagcagcaaccccctggccacaatgcaa
gccctggctgccagtggtgggcagatgtccatttccgctcttgagggcagtggtcaaatg
ttcctgggtggagctggaggtccaggagctggtcttcgccagtccctcttcctaaaccgc
cccactttactgcccctggcgaggagcgcaggcatgggtctggtcggcacccccagggct
tctccactacctggcgccagtggcacaagcccagactcctgctccgtctccccctgctca
agccccgcctccttctgctcattaggcgaagcctcaccacctcctctgggcggagccatg
gctgagtga
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