Carassius gibelio (silver crucian carp): 127935038
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Entry
127935038 CDS
T08819
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127935038
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
EARP complex
127935038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127935038
NCBI-ProteinID:
XP_052388582
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All DBs
Position
A19:16381384..16487836
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AA seq
990 aa
AA seq
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MQKIKSLMARQGLKSPQESVVDMSPVESFRSPSKEELRELREQPTDPQAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLDLLELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYYLTMQWHDEHYKEEETTPGAD
DSSADGSDESTVGRSYVKKKLEHGLSRIWQDVQLKVKAYLLGTDVSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFS
IAQLHEFRFMGQCRSPSVSPSRQPESTEPVELCLFEQFLQGGNPFEMQIDNKEEETEDVL
ASNGYESDELEKNVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNL
NRANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAIYTFFGRNDM
HFQSASLPSQGSQPGVSRQAVPVYWYESSGLGLISSRLRTTLSRMQESLIDMEAGGENAG
PHASPEERKEKVPSPHLSQLVILTSSDTLYGLAERVVATESLVFLAEQFEFLQPHLDTTM
PSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNV
YVDVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGR
ALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTN
LVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctttgatggcccgtcagggtctgaagagtccccaggagagtgtg
gttgacatgagccctgtggagagcttcaggtcccccagcaaggaggaactgagggaactg
agagaacagcccacggatccacaggcagaacaggaaatcattgatagcatagaggaagtg
tacttctccagtgactcctttgacatggtgcaatacgagcttgagaaactcccaccggat
ttggaccttctggagcttgaggagtacagagataagctgaagagacaacaagcagccgtt
tctaaaaaagtggcagacctcattttggagaaacagccctcctatgttaaggagctcgag
agagtgacatctctgcagaccaacttgcagctggctgcagtcatctgcactaatgcacga
aggcagcttcgttctgctaaagaaggcttcactgaagccagtctggggctgttagccaat
cagagacgacggcagctgttgacaggattgttgaagtctctgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgcttgaggaggaggactatccgggcgccatc
cagctgtgtttagaatgccagaaggctgcaagcactttcaaacactacaactgtataagt
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtggcg
ctgtccaaaacctgcaaacactttgatgtttctcactacaccaaagttcaactggcatat
aagctgctggggaagacgcagacggcaatggatcagctgcacatgcatttcacccaggcc
atccacaacactgtcttccaggtggtgctgggatacgtagagctgtgtgccggcaacgcc
gacaccaagttccagaagatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgactgatctctgcaaggccttgtgggaggtgatgctcagttactac
ctaaccatgcagtggcatgatgagcactacaaagaagaagagacgactcctggagcagat
gattccagcgcagacggctcagacgaatccactgtgggccgcagttatgtgaagaagaag
ctggaacatggcttatcgcggatctggcaggacgtccaattgaaagtgaaagcctatttg
ctgggaacagacgtgtccaacttcaagtacgacgacttcattgtggttctggatgttatc
agcaggttaatgcaggtgggagaggaattctgcggcagtaagtctgaggtgttgcaggag
tccattaagagacagagcgtaaactactttaagaactatcacagaactcgtctggaggag
ttgcgaatgtttcttgaaaatgaaacatgggagctgtgccctgtgaagtccaacttcagt
atcgcccaacttcacgagtttagattcatgggtcagtgtcgttctccttcggtgtctccc
agcaggcagccggaatccacagagccggtggagctttgtctgtttgagcagttcctgcag
ggtggaaatccttttgagatgcagatcgacaataaggaagaggagacagaggatgtcctg
gcttctaatgggtatgagtcagatgagctggagaagaacgtgtatcaggactatgacagt
gacagtgatgtacctgaggagctgaaacaagactatgtagatgaacagacaggagacgct
ccagtgaagagtgtgtccagggagacacttcgcagccggaagaggtccgactacaatctg
aaccgagccaatgcccccattcttaccaacaccaccctcaacgtgattcgcctggttgga
aaatatatgcagatgatgaacattctgaagcccattgcctttgatgtcatccactgtgtg
tctcagctctttgattattacctgtatgccatctacaccttctttggccggaatgacatg
cacttccaatctgcatctctgccttcacaaggctctcaacctggtgtgtccagacaggcg
gtccctgtctattggtatgaatcatctgggctgggtttgatcagcagcagactgaggact
acgctcagccgaatgcaggagagcctaatagacatggaggctggaggagagaatgcaggt
cctcatgcatctcccgaggaaaggaaggagaaggtccccagtcctcatctgagtcagctg
gtgatcctgacgtctagtgatacgctctatggcttggctgagagagtcgtcgccactgaa
tcactagtttttctggcagagcagtttgagtttcttcagcctcatctcgacaccacgatg
ccttcagccaagaagcccttccttcagcagttctactcacagactgtatctacagccagc
gagctccgcaaacccatttactggatcgtggcagccaaagccatagattacgaacagatg
ctgttactgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaatgtc
tatgtggatgtccttttaaaggagtttgagaagtttaaccagagactgggagacgtgtcg
aaaatagttcggattcctttgcctgtgtccaatgtcttatgggagcactgcatccgtctg
gccaacaggacgttagtggagggctatgcaaatgtgaagaaatgcagtaatgaaggacgt
gcactgatgcagctggacttccagcagttcctgatgaagctggagaagctcaccgacctc
agaccaattccagacaaggagtttgtagagacctacatcaaagcttactaccttactgag
aacgacatggagcagttcatcaagaaccacagggagtactctatgaagcagctgactaac
ctggtcaacgtctgcctcgggtcccacatcaacaagaaagcgcgacagaaactcctcgca
gctatcgatgacattgaccgtccgaaaagataa
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