KEGG   Carassius gibelio (silver crucian carp): 127935078
Entry
127935078         CDS       T08819                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127935078
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127935078
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127935078
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgib00535]
    127935078
Proteoglycans [BR:cgib00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   127935078
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 127935078
NCBI-ProteinID: XP_052388630
LinkDB
Position
A19:15375848..15391989
AA seq 691 aa
MARFFIIFRSLVLLQALCLALSQVTGPPGPQGPLGPPGPAGTPGSDGIDGEKGPPGPPGP
PGQKGESGEPGPDGSPGEDGIDGLIGAKGERGRLGNPGPKGQPGSSGPPGRPGPGLPGLP
GAAGTIGPPGQIGPTGSKGDMGSPGPPGIPGHPGKPGPPGKFLGLEEGSADLQCPTNCPP
GPKGPQGLQGVKGHKGRSGILGDPGSIGRVGTKGEVGISGEQGIPGPPGPQGLRGFPGMV
GPKGETGPRGYKGISGPIGIPGRPGEEGPQGPPGEPGDKGDMGESGVRGPEGVVGKKGEN
GLPGIDGKDGTPGIPGIKGATGQNGRPGAPGLQGDPGLPGMPGAKGEMGFKGEPGPRGLM
GMQGLPGPQGEPGPPGGPGMEGVPGPKGDRGERGPVGPPGIVGFPGSKGERGPMGVPGAQ
GLTGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDPGHNGPT
GDPGKPGDQGPPGLPGSRGLHGERGVPGMPGIQGPSGRDATDQHLIDVVLKMLQEKLAAV
AVSSKRAVLGGAGVMGPPGPPGPPGPPGPQGPHGLPGGRGIPGMIGASGQIGNTGFKGKR
GTKGERGDPGRPHPGQPGPPGLPGPPGLDGVARDGRPGERGPHGAAGEPGRPGKAGPPGL
PGFCEAAACLAASVYTSPRLQEAGTVKGPST
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggctagattcttcatcatcttcagaagcttggttctgttgcaggcactctgcttggct
ttatcacaagtgaccggtccacccggaccgcagggcccccttggtccccctggccccgct
ggaactcccggctctgacggcattgatggtgaaaagggtcctcctggaccacctggacca
ccaggtcagaagggagagtcaggtgagcctggtcctgatggatctccaggggaggatggc
attgatggtttgattggtgctaagggtgagaggggccgtcttggtaatcctggaccaaag
ggtcagccagggtctagtggaccaccagggcgacctggacctggactgcctggacttcct
ggagcagcaggaaccattgggcctcctggacaaattgggcctactgggtcaaagggtgac
atgggaagtccaggacctccaggaatacccggacatccaggaaagccaggtccaccaggg
aagtttctgggtttagaggaaggcagtgctgacttacagtgtccaaccaactgtccacct
gggccaaaaggtcctcagggcctacagggagtgaagggacataaaggtcgctccgggata
ttgggagatccaggtagcatcggaagagtgggcacaaagggtgaagtcggcatctccggt
gaacaaggaataccaggccctccaggcccacagggtctgagagggtttccaggaatggtg
gggcccaaaggcgagacgggaccacgtggttataaaggaatttcaggaccgatcggcatc
cctggacgccctggtgaagagggaccccaaggaccacctggagagcctggtgacaaaggc
gacatgggagagagtggtgtacgagggcctgagggagtggtcggaaagaagggagagaac
ggtcttccaggaattgatggaaaagatggaactcctggcatcccaggaataaagggtgct
acgggacaaaatggaagacctggagctcctggtctccagggagaccctggtttgcctggt
atgccgggagccaagggggaaatgggatttaagggtgagccaggacccagaggcttgatg
ggaatgcaaggtcttccaggacctcaaggggagcctggtcctccaggtggacctggcatg
gagggagtcccaggaccaaagggtgacaggggcgaaagaggaccagttgggcctcctgga
attgttggcttccctggcagtaagggagagaggggacccatgggtgtcccaggtgctcag
ggtctaactggaaccaagggtgacaagggattccaaggcaaagtgggatcaaagggagat
gttggtgatcctggtgtagagggattggctggggagaaaggagagaagggacaatctggg
gagcccggacctaagggacagcaaggcgtgactggtgacccagggcacaacggccctact
ggagatcccggtaaaccaggagaccagggtcctccaggcttacctggttcacgaggcctg
cacggagaaagaggagttccagggatgccaggaatacaaggaccatctggtcgtgatgct
acagatcagcacctcattgacgtagtcctgaagatgcttcaagagaagttagcagcggta
gcggtgagctccaagagagcggtgctgggtggagcaggtgtgatgggacctccgggtcct
ccgggaccacctggacctccaggacctcagggtcctcatggactgccaggcggccgcggt
attcctggcatgatcggggcctcaggccagataggaaacactggttttaaaggaaagagg
ggtacaaagggagagagaggggatcctggccgaccacatcctggccaaccgggacctcct
ggactgccaggtcctccaggtcttgacggcgtggcacgtgatggtaggccaggcgaacga
ggaccacatggtgcagcgggtgagccaggccgccccggaaaagctggtcctcctggactt
cctggattttgtgaagcagctgcatgtttggcagcctctgtctacacatctcccagacta
caagaggcgggaacagtgaagggcccatccacttaa

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