Carassius gibelio (silver crucian carp): 127935103
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Entry
127935103 CDS
T08819
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935103
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127935103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
DUF3915
Motif
Other DBs
NCBI-GeneID:
127935103
NCBI-ProteinID:
XP_052388665
LinkDB
All DBs
Position
A19:complement(25012986..25037475)
Genome browser
AA seq
2453 aa
AA seq
DB search
MKPIKKQERRSPPSTRAKGVKRRPADSSPQEEKRETEEQTQISPTSPKRHFSSNSDSSQE
GPLRKSGSPEKDGVLSIAVDFGKTEECPGSSKSGGTQSDSNSSTTSASNSPNPLFSRKTA
TFKTRVPKKKYISEHCAGNHGNVSTPSTPPQSSSSSHNASGASQGPAASAAYTDLQGQSQ
LVEDSITGYRHNNVTGPTGRTAGECRERDGVSTSSPQRCSSTDTASEHSADLEVTASRRD
SHSNSQKPQAHNTSASSQESLSSGLAGVLAKGLKNQRVLARQGPRLGEGWPHDRGQEMSG
VFRAGVVRRVSEEHGTVEVQLNGEKTICKYPFRVASDSVDLILDASLPGLAPVAIGTRVC
VPFGGDEGSEGAQQWYREGIVTQVDPHPAVSFPYRVQLREDQSDERKERRGVEDDGRAQA
IWVSRQNLRLLVPPWDLEPPQPAEPGVDGRQVREREWEERDDMEVEQEVVQLTRPTFVQS
LLHPVTVPFSSPHSLSSAVNPAITSVLSVASNRDWEQHRGKDQERDLHRHLERERERDRD
RERERERQKSHPLHSSTPDGVDLEVSCLSQLRDGGISAMGSKGLGAPSQHRPILSKPNYL
SPHLSVVRGLSTPIAPHLPLAPHPNHPPMLLGLDSATGAPVISSTSQLPPLPQTSSRGSL
DKTPSSNSHGASGGGSGSSSSSSRSRTPLTAAQQKYKKGDVVCTPTGIRKKFNGKQWRRL
CSREGCSKESQRRGYCSRHLSMRTKEMEAGGGVGRDRSGASSTGTLTPDLRLSGRTSSEY
DWDDNSRDSSEASSRGGDSRPRLVMTSLIPQELPRDMSRFDFDECEAANMLVSLGSSRSC
TPSFSPVSNQSPFSPAPSPSPTLFGFRPANFSPITAPLTPRRPRHLSGTKIPGTPSTERE
RYISGIMPTFQTNLTFTVPMSPSKRKLDAPPPPLPSALDYAKSDPQLNDPSLSLNTAAFR
VLSPQSQPTTPSSLSFPRQRSVTSRPSSSAASTPPPMLVSPTPPSPLPQDPSSRRIVPLR
DSPVIVRNPDVPLAKFSDGPLSRRGSSRSREHSQPPHHAMGLQAPVPINGAATNGAVLLR
NPAPTLVLVTSSQSLTPVAPGHLAHSNSATLNVSTSNATTGPALALLGSGYKEQERKSGG
TADAGGALPQPVACHPSPTALLPLILPAESPHPAPRKDIIMGRPGTVWTNVEPRSVPVFA
WHSLVPFLETNQTKMSMQPADGQTLVNQGKVEVLKLNKLAEPRCGVALVTEGPTEHPAPQ
RGSPSCPPPTAEDPPVERGGDSETESDADDLFFPVQDNAPSISPVKRRTQSLSALPKDGD
KKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDL
AFQVKEAHFRAHPDWKWCNKDRRKSLSEGRGTPGAKEACERGVSESTEAHSTPQGTDHKV
AGPSWTSPQSDGHGGSMGGQLQRPRAFSQSAVHTLERREKERAQESAGLFHPRPPAHPRR
TSEDVSSDEEPMVICEEGDDDVIEDSFADGSIDLKCKERVTDSDDENEHADEADSKHNFQ
PVHSSLGLSPTVNKDDKEQHEKNLEKKEKRGMGGAKLDNGGPKEGKGGGGGGQVPFHVNS
ASVTGINATLPHEARMYHSQGAVRMAPTVVTSVVRPITSTPISIVSKPAEGGVAVGTLPP
DGKPKLLIGAGGAGGGGYFPSSSPKANGQGSLVTGLVLGGAFPNQPTVQLITPPQPTPCN
GAPSSSSVPFPLLHHQFLPAAPSGGKPVTQVQYILPTLPAAANPSSPSSQQASSILTLPS
ATPTHVSLANGVHSGAGQGIRYASVPAVGGVSPGGGVQAQSPVLPNKMLVPMATVGTGAT
PPQPISLLGPSLPVQNGTQPGSKVIQIASMPVVQTNVHPGGTVATGSSFPVSMPTVTVMA
PGPSPHQTVHLTSPPTRITYVQSSPGVAAPLPLGSTPAVSSTQQAPSPAGPSFLQSQVAT
LGFTAIAPAGQALVQPIVASQPPLLAPCPPPSGLSQQASTATHQLVTAIYPRVSLAGGVV
SVTAVPHTATSTSSSAPQEKTFSAAAAQPHAQTDAQLQSQVNMHMENQRGPEARKETEKQ
RDLVVSKDGHQMPPSGLEESVQHAHKGQHCEGKEDGKKGSNMEQESERDIGGGPSQTERG
ERARAMEGETQTQAETNSKDQQCREAGRREASVLDPPQPPLQTDPPSAKKTKFRPPPLKN
TTDAGDKALFGSSFEERLKELPEFKPEDVLPSPNLQSLATSPRAILGSYRKKRRNSTDLD
SADDPSSPRRKSRRLSSCSSEPNTPKSAAKCEGDIFTFDRAVGETEHILEEFDRVPPSSL
RRMLDQRRALVMQLFQEHGFFPSAQATAAFQVRHSETFPSKVCLQLKIREVRQKIMQTAG
SSETMGGVASGNSDSASTPGPSNPMARENSEADERGRATEEPKKDTGDPQESR
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccattaaaaagcaagaaaggcggtcgcccccatccactcgcgccaaaggagtt
aagaggaggccagcagatagtagcccacaagaagagaagagagaaactgaagaacaaacc
caaatttcacctacctctcccaagagacatttctcctcaaattctgactcatcgcaggaa
gggccactgagaaaaagtgggtctccagaaaaggatggcgtcctcagtatagcagtggat
tttgggaaaacagaggaatgccccgggagctccaagtctggcggaacacagagtgacagc
aacagtagcacgaccagtgccagcaatagccccaaccctttgtttagtcgtaagacggcc
acgtttaagacccgtgtgcccaagaaaaagtacatctcagaacactgtgcaggaaaccat
ggcaacgtcagcactcccagcacacccccacagagcagcagcagctctcataatgcaagt
ggtgctagccagggcccagctgcctctgctgcgtacacagacctacaaggtcaaagccag
ctggttgaggacagcatcactgggtacagacacaacaatgtaactgggcctacaggtaga
actgcaggtgagtgcagagagagggatggggtgagcacatctagcccacagcgttgctcc
tcaactgatacagccagtgaacactcagccgacctagaagtgacagcttcaagacgtgat
tctcactccaactcccaaaagccacaagcacataacacttcagcatcctcacaggagagc
ctgtcatctgggttagctggagtccttgccaaaggtctgaaaaatcagagagttctggcc
cgacagggtcccagattaggggaaggctggcctcacgatcggggccaagaaatgtctgga
gtgtttcgtgctggagttgtgcggagagttagcgaggagcatgggactgtggaggtgcag
ctgaatggagaaaagaccatatgcaagtacccttttagagtggcttctgattctgttgac
cttattcttgatgcgtcacttccaggtttggcaccggtggctataggcacacgagtctgc
gtccccttcggaggtgacgagggcagtgagggagcgcaacagtggtacagagagggtata
gtcactcaagtcgatccacacccggcagtgtctttcccataccgcgttcagctacgggag
gatcaatctgatgagagaaaggagaggagaggtgtagaggatgatggaagggctcaggct
atttgggtctcacgacaaaatctccgcctcctggttcctccatgggacctagagccaccc
cagccagcagagccaggggttgatggtaggcaggtaagagaaagagagtgggaggaaaga
gatgacatggaagtggagcaggaggtggttcaactgactagaccaacatttgttcagagt
ttgttgcatcctgtgactgtacctttcagctcaccccattctttgtcttctgccgttaac
cctgccatcacatctgtactcagtgtagcctcaaacagagactgggaacaacacagaggg
aaagaccaggagagagatttgcataggcacttagagagagaaagggaacgagatcgagat
agggagagggagagggagaggcaaaagtctcatcctcttcattcatctaccccagatggg
gtggacttggaagtcagctgtcttagccagctaagggatggtggcattagtgcaatggga
agcaaaggtctgggggctccttctcagcatcggcccattctttctaaaccaaactacctc
agccctcacctttctgtggtgagagggcttagcaccccgattgcaccccatctgccgctt
gctcctcacccaaatcacccccctatgctcctgggcctggactcagccacaggtgcgcca
gtcatctcttccacatcccagcttcctcccttgccccaaacttcttctcgagggtccctg
gacaagacccccagctccaactcgcatggtgcttcagggggtggctctggatcctcgtcc
tcttcttcccgttcccgcacacccctcacagccgctcaacagaagtacaagaagggcgat
gtggtatgcacccctacaggcatccgcaagaagttcaatggcaaacagtggcgcagactg
tgctcacgtgaaggctgctcaaaggagtcacaaaggcgcggctactgctcgcggcatctc
tccatgcgcaccaaagagatggaagctggaggcggggttggccgtgaccggagtggtgcc
agtagcactggcactctcacacctgaccttcgtttaagtggacgcaccagcagcgagtat
gactgggatgacaactcacgagacagcagtgaagcaagcagccgtggcggggactctcga
ccacgtctggtgatgacttctcttataccacaagaacttccacgtgacatgtcccgtttt
gactttgatgagtgcgaggctgcaaatatgctggtttcacttggcagctcgcgctcatgc
acaccttcattttcacctgtatccaatcagtcaccattctcacctgcgccatccccctca
cccacactatttggcttccgcccagctaatttcagccccatcacagcacctctgacccct
cgccgccctcgacatctcagtggcacgaaaatccctggcactcccagcacagaacgtgag
cgctacatctctggcatcatgcccacctttcagaccaacctgacattcactgtacccatg
agtcccagtaaacgtaagctggatgccccaccacccccgctgcccagtgcattagactat
gcgaaatctgatccccagttaaatgaccccagcctcagcctcaacacagcagcattcagg
gttctgtccccccaaagccagcctaccaccccctcatctctctcattccctcgacagagg
agtgtcacaagtcgaccctcatcctctgccgcatccactccaccccctatgctggtttct
cccacaccaccctcacccctgccacaggatcccagctcacgtcgtattgttcccctacgt
gattcgcctgtcatcgttcgtaaccctgatgtaccactggcaaaattcagtgatggcccc
ctgagccgtagaggaagctcacgctctagggagcacagccagccccctcaccatgccatg
ggcctccaggcccctgtgcccatcaatggcgctgccaccaatggagccgttctccttcgc
aatcctgctcccaccttagtcttggtgacttcctctcagtcattgacacctgtggctcct
ggacatctcgctcattcaaactctgccactttgaatgtgtccacttctaatgcaaccact
ggacctgcccttgcactattaggctcaggatataaagagcaagagaggaagtcaggtgga
actgcagatgcaggtggtgctctcccacagcctgtggcttgccatccttcacccacagct
ctgttgcccctcatccttccagccgagtcccctcaccctgctcctcgcaaagacatcatc
atgggacgacctggcactgtttggaccaacgtggagccccgttctgtgccagtgtttgcg
tggcattcgttggttccttttctggagaccaaccaaacaaaaatgtcaatgcagcctgca
gatggccaaacacttgtaaatcagggcaaagttgaagttttgaaactgaataaacttgca
gaacctcgctgtggagttgcccttgtgactgagggacctactgaacacccagcaccacag
agaggttcgccgtcttgcccccctcctactgctgaagacccacccgtggagagaggaggt
gacagtgagaccgagagtgatgctgatgaccttttttttccagttcaagacaatgctcca
tccatcagcccagtgaaaagacgcacacaatctctcagtgcactcccaaaagatggtgac
aagaagagggaaaaggaccacatcaggcggccaatgaatgcatttatgatctttagtaag
cggcaccgtgccctggttcaccagcggcaccccaaccaggacaaccgtactgtcagtaaa
atactgggtgaatggtggtacgcactgggacccaaagagaagcagaagtatcatgatctt
gccttccaggtgaaggaggctcatttccgggctcaccctgattggaaatggtgtaacaag
gacagaaggaagtccctttctgagggccggggaactccaggggccaaagaagcttgtgag
cgtggcgtgtctgaaagcacagaggcccattccacacctcaggggaccgaccacaaagta
gcagggcccagctggacttcacctcagtctgacggtcacggaggatcgatgggagggcag
cttcaacggcctcgagccttttcccagagcgctgtgcatactctggagaggagggagaag
gagagagctcaggaaagtgcgggactgtttcatccccgtccccctgctcaccctcgacga
accagtgaggatgtgagcagtgatgaagagcctatggtgatctgtgaagagggggatgat
gatgtcatagaagactcgtttgcagacggctccattgacctgaagtgtaaagagagagtg
acagacagcgatgacgaaaacgagcatgcagacgaagctgacagcaagcacaacttccaa
ccagtccattcttctttggggttgtctccaactgtcaacaaagatgacaaagaacagcat
gaaaagaacctggagaagaaggagaagagaggaatgggtggcgcaaagctggataatggg
gggcccaaagaagggaaaggaggaggtggtggagggcaggttccgttccatgttaattcg
gcctccgttactggtataaatgccactttgccacatgaagccaggatgtaccattcacaa
ggcgctgtcaggatggcccccaccgtggtgaccagtgttgttcgtcccatcactagcacc
cctatctccatcgtcagcaagccagctgaagggggcgttgctgttgggaccctacctcca
gacgggaagcccaagctactgattggtgccggcggagcaggaggaggtgggtactttccc
tcctcttcccccaaagctaatgggcaaggaagcttagttactggcctagtcctgggagga
gccttcccaaaccaacccaccgttcagctcatcaccccaccgcaacctactccatgcaac
ggagcccctagtagcagttcagtgccctttcccctacttcatcaccagttcctccctgct
gcccctagtggcgggaaacctgtaacacaggttcagtacatccttccaactctgcctgca
gctgccaatcccagcagtccctcctcccagcaggcctccagcatccttaccttgcccagt
gccacacccacccacgtgagcctggccaatggtgtacattcaggtgcggggcagggaata
agatatgcttcggtcccagcagtgggaggagtcagcccaggaggtggagttcaagcacag
tccccagtgttgccgaacaagatgttagttcccatggcaacagtgggaacaggagctaca
cctccgcagccgatttccctgctgggtccatcccttcctgttcaaaatggcactcaacca
ggaagtaaggtcattcagattgcatcaatgcctgtggtccaaacaaatgtgcatcctgga
ggaacagtggctaccggcagctcgtttcctgtctctatgccaaccgtgactgtcatggcc
cctggacccagccctcatcagacggtgcacttgacatcaccacctacaaggatcacatat
gtccagtcgagtcctggagttgctgctcctttgccattgggttcaacacctgcagtctct
tccacccagcaggccccatcacctgcgggtccatcttttttgcaatcacaggtggctacc
cttggctttactgcaattgccccagccggtcaagccttggttcaacctattgttgcaagt
cagccacccctcctggctccatgtccacccccgagcggattatcacaacaagcctcgaca
gccacccatcaacttgtgactgccatttaccccagagtcagcttagccggaggagttgtg
tcagtgacagccgtgccacacacagcaacttccacatcatcctcagcgcctcaagaaaag
accttttcagctgctgctgcgcaaccacacgcgcagacagatgcgcagctgcagtctcag
gtaaacatgcacatggaaaaccagagaggaccagaagctagaaaggagactgagaaacag
agagacctggtggtgtcaaaggatggacatcagatgccacctagtggtttggaggaatcg
gtgcagcacgcacataaaggtcagcattgtgaagggaaggaggatggaaagaaagggagt
aacatggagcaagagtctgagcgagacataggagggggcccgtctcaaacagagagaggt
gagagagcaagagcgatggaaggggagacacagactcaagctgagaccaacagcaaagac
caacagtgtcgagaggcaggacgcagggaagcttctgtcttggaccccccacaaccccct
ttgcagactgaccctccatctgctaaaaagaccaagttccgcccacctccactgaaaaac
acaactgatgctggcgacaaggcactgtttggctcctcttttgaagagcgtcttaaagag
ctgccggagttcaagcctgaagatgtgctgccctctcccaatctacagagtctagcaact
tcccctagagccatcctgggcagctaccgcaagaagaggaggaactctacagatctagac
tcggccgacgaccccagttcacctcggaggaagagtcgtcgcctgtctagctgcagctca
gaacccaacacgcccaagagtgctgccaagtgtgaaggggacatctttaccttcgacagg
gctgttggagagaccgagcatattttagaggagtttgaccgcgtgccaccttcctctctg
cgtaggatgttggaccagcggcgtgcgctcgtcatgcagctcttccaggagcacggcttc
ttcccctcagcgcaagccacagctgccttccaagttcgccactcggaaacatttcctagc
aaggtgtgcctgcagctgaagatccgcgaggtaaggcagaagatcatgcagaccgcgggc
agttctgaaaccatgggaggtgtggctagcggaaactctgactccgcctctactcccgga
ccatccaatccaatggccagggagaattccgaagcagatgagaggggcagggccacggaa
gagccaaagaaagacacgggcgatccgcaggagtcgagatga
DBGET
integrated database retrieval system
