Carassius gibelio (silver crucian carp): 127935163
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Entry
127935163 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127935163
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127935163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127935163
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127935163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127935163
NCBI-ProteinID:
XP_052388753
LinkDB
All DBs
Position
A19:complement(18595961..18614415)
Genome browser
AA seq
1449 aa
AA seq
DB search
MAATGGGKIRSRRHHIASKPYAKGKQQQPGLISRVTDTVKSIVPSWLQNYFKNGEVSEGD
TSAVGVDRNNVAPPPNGSDEVTPLPDGRHSPEPSTSNTEPSTSRASRNYHEALSRPPLNR
THLHFPSLDGSPLGGTSSLFSQPSTSTAPFSGSPFAVTSNFSLVKEIKDSSSQHEDDNIS
TTSGFSSRASDKDLPTSKNVPPLWSPETERTHSGSQTAHSGLKKPAFNLSVFGTSSSSVL
SSSVLNSSQLGDSPFYPGKTTYGGAAAMRSARSRPATPYQPPVRRQIKAKPAGAQPCGVT
SATARRILQSLERMSSPLADAKRIPSTVSSPLSASLNHTDLDVSNFQAKRKRLEPSVPPV
QKLVVPAAAAVSGNRSVSFRPSLTPGGVNRGVEKNNRETPVRQSPQISDHGQAPSPSTSS
LSYPLSSTPAVSSAGSIGGKMKRDRAIRPSSKKPEDEFVEEPDLPPASLPSSFTLPTLNF
SSPTPTSSLPSKPFATASEEPAANKEPAAPSTPPSVPFTFSSPIVKATAASPPTFSPSSG
FTFSAPTMKTGPSYSNGKIVPTVAPVKSVASEEKEFEGPFKPAKVLKQGSVLDILKGPGF
ASPAQNAVDKPLPSISTSSAALSGFGDKFRPPAGSWSCGTCLLQNKSSDKTCVACLAPQP
NTDSASKSDSKPTEAPASISSLFAPPAGSWDCDTCLVRNKPDVVKCVACDTSKPGTGVKS
RLTLPALSDASSTLSATSSATTTATTTASSATGLLGFGDKFKKPGGSWDCDVCMVQNKAQ
DVKCVACQSSKPGAVAASVSTPVSAPASTAAPLIGFGDKFKNPEGSWECEVCCVQNKAED
QQCVACQSAKPGAKIESKGFSSSFGVQSNSTESGSSAFKFGTSSTDSTSAGLKFGGTFSD
TTSTTSGFKFGFGSSNSTSKSEGFKFGGLSSDAASGGVTLGCASSESTAKTESLSKGFTF
GGSVDDSLEKKTKSQDSSTGFKFGGDGGITFSSQASGSENSAFLFGAKPSEKGSSDSSFS
FSVPPSKAEKDAPASSETVSTTATTTAANVIPIFGKSLVAESSALRFGEPSTKSQTLVTS
TFTFGKTEEKKDTSAPSGAFLFGASKEADKPAPTLGFSFGESDPPKDFPKPTLTFGKPAD
SAEAPKPSFSFGQSMTETSAPKPPFGLMANSSSTPASSSSIPSLFGTPTTSSLTPTPAPS
STFVFGQNTSTDHTVAKTFMFGQQPQDSQPAPPAAPSAAPAPVQPFQFGSGTNSSSTAFT
FGAVASSTPASSAPAPPANPSPFVFSSTTPSSGFGSGQTPIFGQSASQPSAPAFGSAAPS
FSATASPASAFGAKPNSASVFGQQANPAPTFGSAASSTAQGGFQFGSTGGFGAQGSSNSV
FAFGAGSAAPATPAASPAMPTLNPPSGGGFSFGQTPSFNIGSGKSFNATPSGQTSVAGRK
IKTAVRRRK
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaggaggagggaaaatcagatcaagaagacaccacatcgcttcaaaacct
tatgccaaaggcaaacagcagcagcctggcctgatcagtcgggtcacagatacagtgaag
agcatagtcccctcctggctgcagaattacttcaaaaatggagaagtttcagagggtgat
accagtgcagtcggagtggaccggaataatgtggctcctccccctaatggcagcgacgaa
gtcaccccgctcccagatggacgacactctccagagccgagcacaagtaacacagaacca
tctacgagtagagcgtcacggaactaccatgaagctctttcgagacccccactcaatcgg
acccacctgcacttcccctctctggatggttccccattaggtggcacaagctccctcttc
tcccagccctccacatccacagcacccttctcagggagccctttcgctgtaacctccaac
ttctccctggtgaaagagattaaggattccagttctcagcatgaggatgacaatatctcg
actaccagtggcttttcgtcacgtgcatctgataaagatttgcccacatcgaagaatgtg
ccacccctttggtctccagagacagaacgcacccacagtggatcacagacagcccactct
gggttgaaaaaaccagccttcaacctgtcagtctttggcacttcctcatcatcagtgttg
agcagttcagtgctaaactccagtcagttgggggattcacccttctacccagggaagacc
acgtatggaggagctgctgcgatgagatcggctcgttcgcgtccagctactccttaccag
cctcccgttaggagacagataaaggcaaagccagctggagctcaaccctgtggagtaacc
agtgccacagcgagacgcatcctacagtccctggagcgcatgtccagtcctcttgctgat
gcaaaaagaattccgtctacagtttcatcacctctgtcagcttcactgaatcacacagac
cttgatgtttcaaattttcaggcaaagaggaaaaggctggagccgtcagtccctcctgtg
caaaagctggtggtccctgcagctgctgcagtgtctggtaaccgttcggtatcctttaga
ccatcactgaccccaggtggagtgaacagaggagtggagaaaaacaacagggagactccg
gtaagacaatcacctcaaatttcagatcatggccaggctccctctcccagcacaagcagt
ttgtcctaccccttgtccagcacacctgcagtcagtagcgctggttcaatagggggcaaa
atgaagagggatagggccatcagaccttcatccaaaaaacctgaagatgagtttgtcgag
gaaccagacctgccccctgcttctcttcccagcagtttcactttgccaacattaaatttc
tcctctcctacccccacctcatcgctcccctcaaaaccatttgcgactgcctctgaggaa
ccggcagcaaataaggagccagctgcaccatccacaccaccatctgtccccttcacgttc
tcttcacctatcgtcaaggcaacagctgccagtcctccaactttctctccatcatctgga
ttcaccttcagtgcgcctactatgaagacgggcccctcttactccaatgggaaaattgtt
ccaacagtagcaccagtcaaatcagtggccagtgaagaaaaggagtttgaaggacccttc
aaacctgcaaaggttttaaaacagggcagtgtattggatatacttaagggacctggattt
gcatcccctgctcagaatgcagttgataaacctctgccgtctatatcaacatcctctgct
gctctttcgggttttggggacaagttcaggccacctgcagggtcatggagctgtggtact
tgtctactgcaaaacaagtcctcagacaagacgtgtgtagcttgtcttgcaccgcaaccc
aacacagactctgcctctaaatcagacagtaaacccacagaagctcctgcgagcatcagc
tccctcttcgctcctccagctggtagctgggactgtgacacatgtttggtcaggaacaaa
ccggacgtagttaaatgtgtagcttgtgacacgtccaaaccagggactggagtgaaatcc
agactgactttaccagctctttctgacgcctcgtccaccctctctgccacctcttctgca
accaccacagcaacaacaactgcttcttcagcaactggactgttagggtttggggacaaa
tttaagaagccaggggggtcttgggattgtgatgtatgcatggttcaaaacaaggcacag
gatgtgaaatgtgtagcctgtcagagctctaaacctggagctgtagccgcatcggtctcg
accccagtctctgcacctgcaagcactgctgcgcctttgataggattcggggacaagttt
aagaatcctgaggggagctgggagtgtgaggtgtgctgtgttcagaataaggcagaggac
cagcagtgtgtggcttgccagtcagcaaaaccaggggctaaaatagagtccaaaggtttt
agttcatcatttggcgttcagtccaacagtacagaatcaggttcatctgcttttaagttt
ggtaccagctctacggactcaacctctgctggactgaagtttggaggcactttctcagat
actacttccaccacaagtggatttaaatttggatttgggtcctccaactcaacctcaaaa
tcagagggcttcaaatttggaggcttatcctcggatgcagcttctggtggggtcacactt
gggtgtgcctcatcagaatccacagcaaaaacagagagcttgtcaaagggctttacattt
ggtggatccgtagatgactcgcttgaaaaaaagactaaatctcaggattctagtacagga
tttaaatttggtggtgatggtggaatcactttcagctctcaagcttctggctccgaaaac
tcagcatttttgtttggagctaaacccagtgagaaaggaagctcagattcatcctttagt
ttttctgtgcccccatccaaagctgagaaagatgctcctgcttcctcagaaacagtttcg
accactgcaacaacgacggcagcgaatgtcattcctatttttggcaagtctttagtagct
gaatcttctgcattgagatttggggaaccatcaacgaaatcgcaaactctagtgacgtcc
accttcaccttcggaaaaacggaagagaaaaaggacacctccgcaccctccggtgcattc
ttattcggtgcttccaaggaagctgacaaaccggcaccaaccttgggcttctcttttggc
gagtcggaccctccaaaagatttccccaagcctacacttacatttgggaaacctgctgat
tcagcagaagccccaaaaccgtcatttagttttggacagagcatgacagaaacatctgct
ccaaagcccccttttggcttaatggccaactcctcaagcaccccagcttcctccagctcc
attcccagcctttttggcactcccactacctcttccctgactcccacacctgcgccctcg
agtacctttgtgtttggccagaatacctccactgatcataccgtggcaaagactttcatg
tttggacagcagccgcaggacagccagcccgcacctcctgcagcaccttctgctgcacct
gccccagtacaacccttccaatttggctctggtacaaactcatcctccactgcattcact
tttggtgccgttgcgtcctccaccccagcctcttccgccccagctccacctgccaaccct
tccccatttgtcttcagttctaccacaccttcatctggctttggttctggacagaccccc
atcttcggtcaaagtgcgtctcaacccagtgctccagcatttggttcagcagcaccttcg
ttctctgccactgcttcgccagcttctgccttcggagccaagcccaactctgcctctgta
tttggtcagcaagctaaccctgcacctacgtttggatctgctgcttcctccacagcccaa
ggaggattccagtttggaagtactggtggatttggagcacaagggagcagcaatagtgtg
tttgcatttggggctggatcagcagctccagcaactcctgccgccagtcctgccatgccc
actttaaatcctccctctggtgggggcttcagctttggtcagaccccttcttttaacatt
gggtcaggaaagagtttcaacgcaacaccatctgggcagacttcagtcgctggacgtaaa
atcaaaactgctgttcgacgcaggaagtaa
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