Carassius gibelio (silver crucian carp): 127935169
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Entry
127935169 CDS
T08819
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127935169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127935169
03036 Chromosome and associated proteins [BR:
cgib03036
]
127935169
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127935169
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127935169
PBAF complex
127935169
GBAF(ncBAF) complex
127935169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
127935169
NCBI-ProteinID:
XP_052388763
LinkDB
All DBs
Position
A19:complement(19661973..19672814)
Genome browser
AA seq
973 aa
AA seq
DB search
MATQAQGSAAAGPTTSQAGCSSSLSRRMDGGPCCKFWESPEIISQLETVRSWIGKHYKKY
VQTEAPSSKSLSGLVIQLLQFQEDSFGRRANNPSFTKLPAKCFLDLRPGGALCHILGSVY
KFKTEQGWRRFDLQNSSRVDRNVEMFISVEKSLIQNNLLSRPVVYLSPDLEPKQALKLKD
IVVRHQGTVTEEKSQATHQIYTSPSSADEEEWLRPVMRLDRQVMVHWGMCPDSYDSLISA
RDVDGEVEEPPNPDRCWKVHTKWVLDTDTYNEWMNEEDYEIDENGNRMSFRRRIYQSTEE
QKPVKKRRRSPSPPSSESKKKGGKKSSGVYKKRGQPEEAEPEEDLTKEMEDPTPVPNMEE
VILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEPREFGRGMEGEESATEQT
HHIIVPTYTSWFDYNCIHQIERRALPEFYNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTSCRRNLTGDVCSLIRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDAPSGL
VPLQHRPLQVSASQHMLHFPEKLIEKPSDLQNFGLRSDIYAKKHPKSKGASAGREWTEQE
TLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSESSMGPLAYQPVP
FSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRAREEAPPEIFSASFHRAQRVGHN
LDPAFTLQTGSIAELHPDHSEKTDGSGIETMSTEYEQHEKLEGDSILGEVERVKHEEKEE
SEGERGEESTAEESFDMCLTQGDGEEMKRRVELELVEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQ
VKYAEIKARQNVEQQQQAGATQSSSSTAYNPLHQGRSVGSASTGQIVGARHSGAPNGMYQ
TPPSSQTDGATPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagcgcaaggatctgctgccgcgggacctacgacaagtcaagccggttgc
agctcttcgttgagtcgaagaatggacggtggaccgtgctgtaaattctgggaaagcccg
gaaataatctctcagttagaaacggttcgcagttggattggaaaacattataaaaagtat
gtacagactgaggctccctccagtaagtctctgtctgggctggtcatccaactgctgcag
tttcaggaagattcatttggccggcgagcaaataacccaagctttacaaaactcccagca
aagtgttttctggatctaaggccgggcggtgctctctgtcatattctgggatcagtgtac
aagttcaagacagaacagggctggagacgctttgatcttcagaactcatccagagtggat
cgcaatgtggagatgttcatctctgtggagaaaagtctgatacagaataacttattaagc
agacctgtggtgtacctgtctcctgatcttgaaccgaagcaagctcttaaactcaaagac
attgttgtgcgacaccagggcacagtgacagaggagaagtcacaagccacccaccaaata
tatacatcgccctcctcagcagatgaagaagagtggcttagaccagtcatgcgattggat
cggcaagtgatggtacattggggcatgtgtccagacagttatgactcccttatatcagca
agggatgtagatggagaagtagaagaacctcccaacccagacaggtgctggaaggttcat
accaaatgggttctcgacacagacacatataatgagtggatgaatgaggaagactatgag
attgacgagaatgggaatagaatgagtttcaggcgacgtatctaccaaagcacagaggaa
cagaaacctgtaaagaagcgacggcgctccccgtctccaccgtcctctgagtctaagaag
aaaggaggaaaaaaaagctcaggtgtgtataagaagcgtggtcagccagaggaggcggaa
ccagaggaggacctcactaaagaaatggaggatcccacgcctgtcccaaacatggaggag
gtcattctgcctaaaaatgtaaacttgaaaaaagacagtgaaaacactccggtcaaagga
ggcattatggctgatttagatgaccaggaagaggacctgctttctggtgtcagagatgag
gaggagccgagggagtttggccgtgggatggagggggaggagagtgccacggagcaaaca
catcacataattgtgcccacctatacctcctggttcgactacaactgtattcatcagata
gagaggcgagctctgcctgagttctacaatgggaaaaataagtccaaaacaccagaaata
tatcttgcataccgcaacttcatgattgatacataccggctaaaccctcaggagtatctg
acctcaacctcctgtagacgaaacctcacaggagatgtgtgttcactaataagggttcat
tcatttttggagcagtgggggttgatcaactatcaggtagatgcagaaagccgacccctc
cccatgggcccacccccaacaccacactttaatgttctcacagacgcaccgtccggactt
gtcccactacagcacagacccttacaggtttcagcttctcagcatatgttgcactttcca
gagaaattgatagaaaaaccatctgacctgcagaactttggtctacggagtgacatttat
gctaagaaacatccaaagagtaaaggtgcaagtgcagggagagaatggacagaacaggaa
acactcttgcttttggaggcactggagatgtataaggatgactggaataaggtgtccgag
catgtgggcagtcgcacacaggatgactgtattcttcacttcttacggttacccatcgag
gacccatacctagagaactctgaatcctcaatgggtcctctggcctatcagcctgtcccg
ttcagccagtcagggaaccctgtaatgagcactgttgctttccttgcatctgtggttgac
cctcgagttgcctctgcagccgccagggcagctttagaggaattctcaagagcaagagaa
gaggccccacctgagatattcagtgccagctttcaccgagcacagagagttggccataat
ttagatccggcctttacactccaaactggcagcattgcagaacttcatcctgaccattca
gaaaagactgatgggagtggtatagaaacaatgagcactgaatatgagcaacatgaaaag
ctcgagggtgatagcatcttgggagaggtagagcgtgtgaagcatgaagagaaagaagag
agtgaaggagagaggggagaggagagcacagcagaggagagttttgacatgtgcctcacc
caaggcgatggagaggagatgaagaggagggtggagcttgagctggtggagggaaacatc
gccacagctgctgctgcagcactggcctctgcagctaccaaagcaaagcacttggctgca
gtagaggagaggaaaatcaaatctctggtggctctgctggttgagactcagatgaagaag
ttggagatcaaactgagacactttgaagagctggagaccattatggatcgagaaaaagag
gctctggagcagcagagacagcagttattgtcggagaggcagaacttccacctggagcag
gtgaaatatgctgagataaaggcacgacagaatgtggaacagcagcaacaagcaggagcc
acacagagcagcagtagtacagcatacaaccctcttcaccagggtcggtcggtgggcagt
gctagtactggacagatcgtgggtgctcggcactctggagctcccaatggcatgtaccaa
actccaccatcctcacagactgatggggcaacacccatgtaa
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