Carassius gibelio (silver crucian carp): 127935307
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Entry
127935307 CDS
T08819
Name
(RefSeq) DENN domain-containing protein 3-like isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127935307
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127935307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_EML
Beta-prop_LRRK2
WD40_WDHD1_1st
dDENN
Beta-prop_TEP1_2nd
uDENN
SPA
Beta-prop_WDR75_1st
DUF5074
Motif
Other DBs
NCBI-GeneID:
127935307
NCBI-ProteinID:
XP_052389012
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All DBs
Position
A19:26585741..26610578
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AA seq
1277 aa
AA seq
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MAGNIPSGLLEACLVLGVSNERLKDIHLTQLQGKGKEPLVEAEVLQVHAPPFVTKESSSN
GTQQDLDSAFCRGQRRRSFKKKRDRPLSTISDSGQTNEPVVSGSDDLSVPQNIDLIALLQ
LCFPDGLRITNESREDSYHFLVFTDVFGNQTHGVVAQYCKPVHYQQDNGIHQNSQQLKKL
QRLYTTFSICVISKYPYYNALRDCLSSFLLQLKTSRMCDFEEQVKEFSAKLALVPIPPPG
PLNVVFNLRPFLIELPSRLDVDRPVMDLDLHLPFLCFKPKQILQIISSILMEQRVVFLST
NWAKLTLVSECFMVFIHPLRWQHPFVPVLSRQMLDFIMAPTAFVMGCHTSHFEEVAEELD
DLVLIDIDKGTVSSSTSNRFDLPDVPLTARDCFIFRAKGLQLHYDLDVCDAASRSDINDQ
RAHRRQWQRKVNSVILNVSMELIVNIFSEVCDFLNYEHRVFNSEEFLRSREMTDHTFYKK
VLDTHIFHSFLRDRLNQRNDAFTRMQLNIRSSESRRIKTLTVSPRRPTMEAINRKFVQPE
NGLNRRLGMSMPNLADHRLLTVPIRQTSMGTMTFQSAGSWSPSRLIKTFKLPDFPPPLSY
QYVQNYYNDLIRDLSKAISGASPDDSALLARYYYLRGLVNSVAGKRLDALTDFQSLYKTD
MEIFPAEMLNVLVESLPVEERKTAERRPDLKRLISRVKRESDRERARPVDGGSVKRFKLP
KKHLHMEDFVRRVQESGIVRDQGTIQRLFEALTVGQQKQVDPETFCFFYNFWKESEGASQ
DVDLPVVVLEHLETDECVYKLSSSVKTSHGVGKIAMTQRRLFLLTEGRPGYFEITKFRDI
EDVKISSAPFLLLRIPTLKIKTSHRKETFEANLKSECDVWHLMIREMWAGRKMADNHKDP
QFMEQALTNVLLMDAVVGSLQSQKAIFAATKLAYFDKKKHEVPTTVPETTSETLKHKINP
SLDQTAPQAVDILLYTPGQLGVSELDGGGNPKLWCALSDGKVLVFDAASWTMQHNSVQVG
KSRLNCMLAVNQQQLWIGSKDSFIYIINSRSVSCNKQLMEHRGAVTGLALEERTDRFSQT
LAYSCSEDSSVIVWDVSTLQVKGQFRVPCVRPQSIQIHNGMLWCCGGDCLLEVRRNGTVH
RKVSLPNHLLSSPRGFSSFLLFNESEQLWAGFADAGELCVWHCRDLNKPFIRIQLKDCTA
VVCMIRVKNQIWVGCHGRSPEGKTRGKIYVLNKDRYTVEKELMAHEDSVQTLCSAEDRYV
LSGAARADGKIGIWKVE
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaacatcccatcgggtctgttggaggcctgtttggtgctcggagtctctaat
gagcgtctgaaagacatacatctgacgcagctgcagggtaaaggtaaagagcctctggtg
gaggcggaggtgctgcaggttcacgctcctccgtttgtgacgaaggagagctccagtaac
ggcactcaacaggatctcgattcagccttctgcagaggccagcggagacgctcctttaag
aagaagagagaccgaccgctttccaccatcagcgactccggccaaaccaacgaaccagtg
gtgtccggctcagacgacctcagcgttcctcagaacattgacctgatagccctgctgcag
ctctgcttcccagatgggttgagaataaccaatgagagcagagaagacagctatcatttc
ctggtgttcaccgatgtgtttgggaaccagactcatggtgtggtggctcagtactgcaaa
ccggttcattaccaacaagataacgggattcatcaaaatagtcagcagttgaaaaaactg
cagcgtctctacaccacgttcagcatttgtgtcatctccaaatatccttattataacgcc
ctcagagactgtctgtccagtttcttgctccagctgaagacgtcccgcatgtgtgacttt
gaagagcaggtgaaggagttttctgccaaactggctctggtccccatcccaccccccggg
ccgctgaatgtggtgttcaatctcaggccctttctgattgaacttccctcccgactggat
gtggatcggcccgtcatggacctcgatcttcacctgccctttctgtgtttcaaacccaaa
cagatcctgcagatcatcagcagtatcctgatggagcagagggtggtgtttctgtccacc
aactgggccaaactcacgctagtctccgaatgcttcatggtcttcattcacccgctgcgc
tggcagcatccgttcgtacccgtcctgtctcgccaaatgctggacttcatcatggcgccc
accgccttcgtgatgggctgccacacgtcccacttcgaggaggtcgcagaggagttggac
gatctggtgcttatagatattgacaaaggaacagtgtcttcttcaacttcaaacagattt
gatcttccagatgtgccactgacagccagagactgttttatattccgagctaaaggactg
cagcttcactatgatctggatgtgtgtgacgccgccagccgatctgacatcaacgatcag
cgcgctcacaggagacagtggcagcgcaaagtcaactccgtcatcctgaacgtcagcatg
gagctcatcgtcaacatcttcagtgaggtttgtgatttcctgaactatgagcatcgtgtt
ttcaacagcgaggagttcctcaggtccagagagatgaccgaccacacgttctacaagaag
gttttagacactcatatattccactcatttctacgggatcgtttgaaccaaaggaatgac
gctttcactcgcatgcagcttaacatccgctcatccgagtctcgcaggataaagaccttg
acagtgtctccacgcagacccacgatggaggcgatcaaccgcaagttcgtccaaccagag
aacggcctgaacagaaggctggggatgagtatgccaaacctggcggatcaccggctgctc
acggtcccgatacgacagacgtccatggggaccatgacgttccagagcgcaggttcctgg
agtccctcaaggctgatcaaaacgtttaaactcccagatttcccgccaccgctctcctac
cagtacgttcagaattactacaatgacctcatcagagacttgagcaaagccatctccggt
gcatccccagatgactccgccctcctggcacgttactattacctgcgcgggctggtgaac
tctgtcgctgggaagcgtctggatgccctcacagacttccagagcttgtataagacagac
atggagatctttcctgccgagatgctgaacgtgctggttgagtctctaccggtggaggag
aggaagacggccgagcgacgccctgatttgaagcgtctgatcagccgggtgaaaagagag
agtgatcgagagagggctcgaccagtggatggcgggtcggtgaagagattcaaactgccc
aagaaacacttgcacatggaagactttgttcggcgtgttcaggagtcgggtatcgtgaga
gatcagggcaccatccagcggctgtttgaggcgctgactgtgggtcagcagaagcaggtg
gatccagagaccttctgcttcttctacaacttctggaaggagtccgagggggcgtctcag
gacgtggatctgccggtcgtcgtgctggagcacctggagaccgacgaatgtgtctataag
ctctcgtcctcggtgaagaccagccacggcgtggggaagatcgccatgacccagcgcagg
ctcttcctgctgacggagggacggccgggatacttcgagatcaccaagttcagagatatc
gaggacgtgaagatctcttctgcacctttccttctgctgaggatcccgacgctgaagatc
aaaacgtcccacaggaaggagacgttcgaggccaatctgaagtcggagtgtgacgtttgg
cacctgatgatcagagagatgtgggccgggaggaagatggcggacaaccataaggaccct
cagttcatggagcaggccttgactaacgttctgctgatggacgctgtggtcggcagcctg
cagtcccagaaagccatcttcgctgctaccaaactggcctactttgacaagaagaagcat
gaggtgcccacgacggtccctgaaactacatctgagaccctgaaacacaagatcaacccg
tctctggaccagacggctcctcaggcggtggacatcctgctctacacacctgggcagctg
ggtgtttcggagctggacggcggtggaaacccaaagctgtggtgcgctttgagcgatggg
aaggtgctggtgtttgacgcggccagctggacgatgcagcacaactcggttcaagtggga
aagtcccgtctgaattgcatgctggcagtgaaccagcagcagctgtggatcggctcaaag
gattctttcatttacatcataaattcacggagcgtttcctgcaacaaacaactgatggag
catcgtggtgcggtcacgggactcgccctggaggagagaacagacagattcagtcagacg
ctggcgtactcgtgcagtgaggatagcagtgtgatcgtgtgggacgtgtccacgctgcag
gtcaaaggacagttcagagtcccctgtgtcagaccgcagtccatccagatccataacggc
atgctgtggtgctgtggaggtgattgtctgctggaagtgcgcaggaacggcacggttcat
cgtaaggtgtctcttccaaatcacctgctgagctcaccgaggggcttcagcagtttcctg
ctctttaacgagtcggagcagctgtgggccggtttcgcagacgcaggggagctgtgtgtg
tggcactgcagagacctgaacaaacccttcatcaggatccagctcaaagactgcaccgcc
gtcgtctgcatgatcagagtcaagaaccagatctgggtgggctgccacggacgcagcccc
gaggggaaaacccgcgggaagatctacgtgttgaacaaggatcgatacacggtggagaag
gagctgatggcacatgaagacagcgtccagactctgtgctcggctgaagatcgatacgtg
ctcagcggagccgcgcgggccgacggcaaaatcggcatctggaaagtggagtag
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