Carassius gibelio (silver crucian carp): 127935337
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Entry
127935337 CDS
T08819
Name
(RefSeq) low-density lipoprotein receptor-related protein 12-like isoform X1
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127935337
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127935337
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Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
127935337
NCBI-ProteinID:
XP_052389083
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Position
A19:6970279..6981634
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AA seq
873 aa
AA seq
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MDHISSLNKICLVWTHLLFVFMVNAVSSQHSENVYVSGMANACGDVAEQIRASSGVITSP
GWPFEYPSRINCSWNIRANPGEIITISFQDFEIQSSHRCGLDWISIGTYKNLDGYRACGS
SIPAPYISSQDHVWIKFHSDDSMTGKGFRLSYVTGKSEEASCKPDQFHCANGKCIPESWK
CNTMDECGDNSDEELCAQPNPSAFFSFQPCAFNQFPCLSRYTRVYTCLPESLKCDGSIDC
QDLGDEIDCDVPTCGEWLRNFYGTFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFMDFK
LDGTGYGDYVKVYDGLEENPGRLLRVLTAFDSRAPVAVVSSSGQLRIHFYADKINAARGF
NVTYHVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDELNCSNCQEDEFPCSRNGA
CYPHSDRCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESC
PVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREA
PPSYGQLIAQGLIPPVEDFPACSGNQASVLENLRLAVRSQLGFTSIRLPTTGRHSNIWRR
LFNFTRSRQSGSLALVSADTEERSDGSGSAREPERLGSRRGLLPLDSDDTDTESEQHPRR
DVPGAVGGLMAPLPQKTPPTTAVEAIVSVSASSAPLVSRESSISESISESSGVTGSPTTN
TSASGRSPFGSALSRVTRSLRWIRFSLGRSRDGGSSGIGQNHSPLRQLEQGSVGCTGIGI
RGEDEDDVELLIPVSDASSLDSDESSRPLLEQGLEQAFGPHLTPAPVSLRGRLVGRDGPC
EHCGIVHTARIPDACLEATVKTESSDDELLLLC
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatttcgagtttaaacaagatctgtttggtatggacacatctactcttcgtc
ttcatggtaaatgcggtttcgtcgcagcacagcgagaacgtatatgtatcaggcatggcg
aacgcctgtggagatgtagcagagcagataagggcgtccagtggagtgatcaccagccct
ggctggccctttgaatatccttctcgcatcaactgcagctggaacatcagggccaaccct
ggagagatcatcaccatcagttttcaggactttgaaattcagagctcgcacagatgtggt
ttggactggatctccattggaacctacaagaacctggatgggtaccgggcctgtggctcg
tctattcctgccccatacatctcctctcaggatcacgtttggatcaagttccactctgat
gacagcatgactggaaaaggcttcaggctttcttacgtaacagggaaatccgaagaagcc
agctgcaagcctgaccaattccactgcgctaatggaaagtgcatcccagagtcctggaag
tgtaacaccatggatgaatgtggcgataactcagacgaggagctgtgcgcacagcctaat
ccctccgcgttcttctccttccagccttgcgccttcaaccagttcccttgtctctcacgc
tacacccgtgtttacacctgtctgccggagtcgctcaaatgcgacggcagcattgactgt
caggacttgggtgacgagatcgactgtgacgtgcccacctgtggtgaatggctgcgcaac
ttctacggtactttcagctcgcccaactatcctgacttctatcctcctggcagtaactgc
acctggctgatcgacaccggcgaccaccgtaaggtcatcctgcgctttatggacttcaag
ctggacggcacaggctatggcgattatgttaaagtctacgatggattagaggagaacccc
gggcgtctgttgcgtgtgttgactgcgttcgactctcgagcccctgtagcagtggtgtcc
tcttcaggacagcttcggatacacttttatgctgataaaatcaatgcggctcgagggttt
aacgttacgtatcatgtagacggtttctgcctgccgtgggaaatcccgtgcggagggaac
tggggttgctacactgaacaacagcgctgtgacggctactggcactgtcccaatggcagg
gacgagctcaactgcagcaactgccaggaagacgagttcccatgctcgcgaaacggtgca
tgctacccacactctgaccggtgcaactaccagaaccgctgcccgaacggctccgatgag
aagaactgctttttctgccaacctggaaacttccattgcaagaacaaccgctgcgttttt
gaaagctgggtgtgtgacgcgcaagacgactgcggggacggaagcgatgaggagagctgc
ccggtaatcgtgcccacgcgagtcatcactgccgctgtaatcgggagtctgatctgcggc
ctgctgctggtcatcgctctgggttgcacatgcaaactctactcactcaggatgtttgag
cgcaggtcatttgagactcagctctctagagtggaagctgagttactgagaagagaagct
cctccatcgtatgggcagctgattgctcaaggactgatccccccagtggaagattttcct
gcctgctctggaaaccaggcatctgttttagaaaacctaagactggcagttcgctctcag
ctaggattcacctcaatccggctccccaccacaggacgccacagcaacatctggagacgc
ctgttcaatttcacgcgttcacggcagtctggttctctcgcactggtgtctgcggacaca
gaagagcgctctgatggcagtggctccgcacgtgagccggagagacttggctctcgccgt
ggactcttgcccttggactctgatgatacggacactgagagtgagcagcatccccgcagg
gatgtcccaggagctgttggaggcctgatggccccactgccacagaaaactcccccaaca
acagcagtggaagccatcgtctccgtgtctgccagctcggctccactggtcagccgcgag
agcagcatctctgagagcatctcagaaagttctggagtaactggatctccaactaccaat
acttctgcatctggaaggagccccttcggcagcgctctaagccgggtcacccgcagccta
cgctggattcgtttctctctggggcgctctagagatggagggtcaagtggcattgggcag
aatcacagccctctgcggcagttggagcaaggaagtgtgggttgcactggtattggcatt
agaggcgaggatgaggatgacgtggagctcctcattcccgtctcagatgcaagctcactg
gacagtgatgagagctccaggccgctgctggaacaaggcctggaacaggccttcgggccc
cacctgacccccgctccggtctctctcagaggccggctggtgggtagggatggcccctgt
gaacactgtggaattgtccacacggcgcggatcccggacgcttgtctggaggcgacggtg
aaaacagaatctagtgacgacgagttactgctgctctgttaa
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