Carassius gibelio (silver crucian carp): 127935350
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Entry
127935350 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935350
04121 Ubiquitin system [BR:
cgib04121
]
127935350
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127935350
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127935350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
SPOB_ab
hAT-like_RNase-H
zf-met2
Motif
Other DBs
NCBI-GeneID:
127935350
NCBI-ProteinID:
XP_052389107
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All DBs
Position
A19:complement(27840418..27842394)
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AA seq
607 aa
AA seq
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MLIIMSGKKSKVWDHFEKSKDDPKKAVCKLCRQTFAYHSSTSNMSYHLKHAHPQYSSNDV
ASCASTSQSTMMQQRFVLRPPLSEKRKREITEKIVDFIALDMRPINVVRGDGFKEMFEFL
EPGYTIPKRDTIMHGLTSKFNTTKEILVKKIQSCTAVSFTTDTWTSIKSEGYMTVTAHFT
SEDWQQHSFVLETKVLEESHTATNIKERLSEVVEEFKIPAEKRVAVVHDNAANMVLCTEL
ISEDPSWGNAKGVRCAGHTLQLCINAALKTDPICQCIAAARRLVWHFKKSTKTTTALTHK
QKQQNVAEHKLIQDVSTRWNSTYFMLERLLEQRWPVTAVLSDPEITKRSERGLDLTTAHW
LTAEDTVAVLKPMVTLTELLSQDLNASLSATLPMLINMKRRHLVLRNEDSPTTKALKTEL
AKEIDTRWQLTENIATSIYIQAAVLDPRFKSLSFFDQHEREDAYSTVSDLAESLSTETAP
ESDHDSISPAEEGEPEPKKEKQAEISMLMAIDEEEHAEEKDEIKMYLADKTKVDSGPLAW
WQKNEHRYPKLAKAAKRLHCIPSTSTPSERIFSKAGFIVNKSRSSLLPNNVDKLVFLSHN
MKKLKSN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctaataattatgtcaggaaaaaagtccaaagtgtgggatcattttgaaaagtcgaag
gacgaccctaaaaaggctgtttgcaaactctgcaggcaaacatttgcctatcactcgtca
acatcgaatatgtcttatcatttaaaacatgctcatccacaatatagcagcaatgatgtg
gcgtcgtgcgcttcgacttcgcagtcaacaatgatgcagcagagattcgttttgagaccg
cctctaagtgagaaaagaaagcgagaaattacagagaaaattgtcgatttcattgcgctt
gatatgagaccaatcaacgttgtccgtggtgacgggttcaaagaaatgtttgaattcctc
gaaccaggctacaccattcccaaacgcgacacaataatgcatggcttaacaagcaagttc
aacacgactaaagaaattcttgttaagaaaattcaaagttgtacagcagtcagctttaca
acagacacatggacctctatcaagagtgagggttacatgaccgttactgcacacttcacg
tctgaagattggcaacaacattcttttgtgttggaaacaaaagtgctggaggagagccac
acagctaccaacataaaagagcgactcagtgaagtggttgaagaatttaaaatacctgca
gaaaagagggtagcagtcgtacatgacaatgccgctaatatggtgttgtgcacagaactg
atttctgaggatccatcctggggtaatgcgaagggcgtccgttgtgcagggcacacgtta
cagttatgcataaacgcggctcttaaaactgaccccatatgtcaatgcatcgctgctgct
agacgccttgtgtggcatttcaagaaaagtactaagactacaacagctctgactcataaa
cagaagcagcagaatgttgcagaacacaaacttatccaagatgtctccacaagatggaac
tccacgtacttcatgctggagagactcttggaacagagatggccggttacagctgtgctg
tcagaccctgaaattaccaaacgttctgaacgaggtctagatctcacaacagcacattgg
ctgacagcggaggacacggtcgcagtgctcaagcctatggtcactctcactgagctgctt
tctcaggatttaaacgcatccctatctgccacattgcccatgttaatcaacatgaagagg
cgccatttggtgctgcgcaacgaagacagtcccaccacaaaagcactaaagacagaacta
gcaaaagaaattgacacgagatggcaactgacggagaatatcgcgaccagcatttatatt
caagctgctgtcttagacccacgttttaagagcttgtcattctttgaccaacacgaacga
gaagatgcgtactccacagtgtcggatctggcagaaagtttatctacagaaactgcgcca
gaaagtgatcatgacagcattagccccgcagaggagggtgagcccgaaccgaaaaaggaa
aagcaggccgagatatccatgctgatggccattgatgaggaggagcatgcagaagagaag
gatgaaataaaaatgtacttggcagataaaacaaaggttgattcgggaccattggcatgg
tggcaaaaaaatgaacacagatatccaaagctcgctaaagcagctaaacgactccactgt
atcccttccacatccactccatcagagcgcatattttcaaaggccggcttcattgtgaac
aagtcgagaagctcccttcttcccaacaatgtggacaagctggtgttcctctcacataat
atgaaaaaattaaaatcgaattga
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