Carassius gibelio (silver crucian carp): 127935390
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Entry
127935390 CDS
T08819
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04814
Motor proteins
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127935390
09142 Cell motility
04814 Motor proteins
127935390
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127935390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127935390
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
127935390
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
127935390
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127935390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML
WD40
WDR55
Dynein_IC2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
127935390
NCBI-ProteinID:
XP_052389166
LinkDB
All DBs
Position
A19:16735612..16789463
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAEAVPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSKSMSTPSETGSQDSVDGAAAGRTLQWDTDPSVLQLQAD
SELGRRTHRLGPSKITQVDFLPREVVSYCKETQTPLAAHQSEEDEEEEEEVTEPKAGPEN
DLQEEEESKDTKEGHPRELTEEEKQQVLHSEEFLIFFDRGIRVMERALAEDSNIFFDYSG
RDLEEKEGDLQGGSSLSLNRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNNDTEVPTASVTIDGAPALNRVRWAAGGKEVAVGDSEGRVWIYDVGELAVPHSED
WAHFGRTLMEIRANHGDGEEEGPVELAA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacctaaaagctgaacttgagcgcaagaaacagcgccttgctcaa
atcagagaggaaaaaaagagaaaggaggaagaaaaaaagaagaaagagtcagagacacaa
cagaaagcggaagctgttcctgaggactcagatttggaccgcaagcgcagggagaccgag
gccctcctccagagcattggcatctcacccgaacctccattagtcccgacacccatgtcc
ccatcaaagtcaatgagcacacccagcgaaacaggcagccaggactcggttgatggagca
gctgctggcaggaccttgcagtgggacactgacccctctgttcttcagctgcaggctgac
tctgagctcggtcgtcgaacacatagattgggaccttctaagataactcaggtggatttc
ctgcccagagaggtggtgtcctactgtaaagagactcagacaccgctagcagctcatcaa
tctgaagaagatgaagaggaggaagaagaggtcacagaaccgaaagctggcccagaaaat
gacctgcaggaggaggaagaaagcaaggacacaaaagaaggccacccgcgggagctgacg
gaggaagagaaacagcaggttttgcactcggaggagttcctcatcttctttgaccgcggt
atccgtgtgatggaaagagcgttagctgaggactccaacatcttctttgactacagcgga
cgagacctggaggaaaaagagggagatctgcagggtggctccagtctctctctcaatcgt
ctgttctatgatgagcactggtcaaagcacagggtcatcacctgtctggactggtcccct
cagtaccctgagctcttggtggcctcctacaacaacaatgaagacgctcctcatgagcca
gacggtgtggctttagtgtggaatatgaaattcaagaagaccacaccagagtacatctac
cactgccagtctccagtggtgtcggtgggtttcgctcggtttcatcctaacctgttggtg
ggtggcacgtactcggggcagattgttctctgggacaaccgaagtcaccgaagaacgccg
gttcagaggacccccctgtccgctgcagcacacactcaccctgtctactgcgtcaatgtg
gttggcactcagaatgccaacaacctgatcacggtgtccacagatggccggatgtgctcc
tggagcctggacatgctgtcacagcctcaggagagcatggagcttgtttataacaagtct
aagccggtggctgtaactgggatggccttccccactggagacgtcaataattacattgtt
ggcagtgaggagggaacagtgtatacagcatccagacatggcagtaaagctggcatctgt
gagatgtttgaaggccatcaggggccagtgacgggcatcagttgtcacagtgctgtgggt
cctgtcgatttctcccacctctttgtcacctcttcttttgactggacggtaaaattgtgg
agtacaaagcaaaacaagccactgtactccttcgaggataatgcagactacgtctacgat
gtgatgtggtcccccgtgcacccctcgctgttcgccgccgtggacggcatgggtcgactg
gatctgtggaacttgaacaacgacactgaggtgcccaccgctagtgttacaatagacgga
gcccccgctctgaaccgcgtccgatgggccgcagggggcaaagaggtcgctgtgggagac
tcagagggacgcgtgtggatatacgacgttggagagctggccgtgccccacagtgaggac
tgggcccacttcggccgcacgctgatggagatccgtgccaaccacggggacggtgaggag
gaggggcctgtggagctggccgcgtaa
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