KEGG   Carassius gibelio (silver crucian carp): 127935411
Entry
127935411         CDS       T08819                                 
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2b isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127935411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127935411
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127935411
 Complex B
    127935411
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7
Other DBs
NCBI-GeneID: 127935411
NCBI-ProteinID: XP_052389200
LinkDB
Position
A19:21590992..21598622
AA seq 476 aa
MSDFDEFERQLSENKQGDSLNGHERDKENRHRRRSPSRSRSRERKRRSKERRSRERRSDS
KDRRHRRSEHTQNPPQDNVSRSPHREKKKIKIKKYWDVPPPGFEHITPMQYKAMQAAGQI
PATALLPTMTPEGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLG
GLTQAPGNPILAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLP
GMSENPSVYVPGVVSTVVPDTIHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDTAT
GLSKGYAFCEYVDVNINDQAIAGLNGMQLADKKLLVQRASVGAKNATMTSINETPVTLQV
PGMMNNPMGQMGGIPTEVLCLMNMVAPEELVDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLDVPGTGKIFVEFTTVFDSQKAMQALTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtctgattttgatgaatttgagaggcagctttctgaaaacaaacaaggtgacagtcta
aacggtcatgagcgggacaaagagaaccggcaccggcgacgcagcccatcacgcagccgc
agtcgagagaggaaaaggagaagcaaagagaggagaagcagggaacgccgcagtgacagc
aaagaccgccgccataggcgcagtgaacatactcagaaccctccccaagacaatgtcagc
cgttctcctcaccgggagaaaaagaagatcaaaattaagaagtactgggatgtgccgcct
cctggctttgagcatattacacccatgcagtacaaggcaatgcaagccgctggtcagatc
ccagctaccgctttgctgcccaccatgactccagaaggcctggcagtaacaccgacccca
gtaccagtagtgggcagccagatgactcgccaggctcgcaggctttacgttggcaacatc
ccatttggcatcacagaggagtctatgatggacttcttcaatgcccagatgagacttggt
ggtctaactcaagctccaggaaaccctatcctcgctgtccagattaaccaggacaagaac
tttgctttccttgagttccgatcagtggatgagaccacccaggccatggcatttgatggc
atcatcttccaggggcagagtttaaagattcgccggccacatgactatcagcctttacct
ggcatgagtgagaaccccagcgtatatgtcccgggtgtggtgtccactgttgtaccagac
actattcacaagctcttcattggtggtttgccaaactatctcaatgacgaccaggttaaa
gagttgttaacctcttttggacctctcaaagccttcaatttggttaaggacactgctacc
ggcctctcaaagggctatgctttctgtgaatatgtggatgttaacatcaatgatcaagct
attgcaggactgaatggtatgcagttagcagataagaagctgctggttcagagggcaagt
gtaggagccaagaatgccacaatgacaagcataaatgagactccagtgacactgcaagtg
ccggggatgatgaacaaccccatgggacagatgggcggtattcccactgaggtcctgtgc
ctgatgaacatggtggctccagaggaactggtggatgatgaggagtacgaggagatagtg
gaggacgtgagggatgaatgctccaaatacggccaggtcaagagcatagagattccccgt
cctgtcgatggccttgatgtccctggaaccggcaagatctttgtggagttcacaactgtt
ttcgactcccagaaagccatgcaggccttgacgggaagaaagttcgccaacagggtggtg
gtgaccaagtactgcgatccagatgcttaccaccgccgagacttctggtag

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