Carassius gibelio (silver crucian carp): 127935449
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Entry
127935449 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127935449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127935449
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127935449
Chromatin remodeling factors
NuRD complex
127935449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
DEAD
HTH_Hrp3
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
127935449
NCBI-ProteinID:
XP_052389278
LinkDB
All DBs
Position
A19:complement(24428036..24460783)
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AA seq
1930 aa
AA seq
DB search
MSGSEDDFEHRSMMQDDDDLDEELSENDAPKVKKKKKAKKSRESKGSKRNRSRREDIAIS
SPEPVEGPDLDDGEEDHSDSEGSDYTPGRKKKKRASTTKDKKRSSSGADRISAASKRREP
EEEEDEDDDDAEPKSSSQLLDTWGMEDIDHVFTEEDYRTLTNYKAFSQFVRPLIAAKNPK
IAVSKMMMVLGAKWREFSTNNPLRGSAAATTALAAASASVSVEAAEESPVTAPTAQISAE
PTPAAPIRKAKTKEGKGPNARKKSKPAPKPQEKKVKTKKVAPLKIKLGGFSSKRKRSSSE
EDDVDVDSDFDDGSMNSVSVSNGSNSRSSRSSTKKKPKKKTKKGDDDGDGYETDHQDYCE
VCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEAREDASDGEEEN
EVVGEAEEDDHHMEFCRVCKDGGELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCP
TMKGKVQKILTWRWSEPPPPTPVPRPSDLPADAPNPMPLAGRPEREFFVKWHNMSYWHCS
WVSELQLEMHCQVMFRNYQRKNDMDDPQPVDFGVEGDEEKSDKRKKKDPTYARMEEKYYR
FGIKMEWMMIHRILNHSVDKKNNCHYLIKWRDLTYDQATWEADDMDLPEYDTYKLQYWNH
RELMMGDEGKPGKKIKVKGKVRKLDRPPENPVVDPTIKFERQPDYLDATGGTLHPYQMEG
LNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPGMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSRMKKEASVKFHVLLTSYE
LITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELF
HLLNFLTPERFSNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELI
LRVELSPMQKKYYKFILTRNFEALNTRSGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAA
KIPNGMYEGSTLTKASGKLMLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKY
ERIDGSITGGMRQEAIDRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEGEGENKEEDSSVIHYDDKAIDRLLDRNQDATDDTELQSMNEYL
SSFKVAQYVVKDEEEAEEEVQREIIKQEESVDPDYWEKLLRHHYEQQQEDLARNLGKGKR
IRKQVNYNDGSQEDRDWQDDQSDGQSDYSVASEEGDEDFDERTEANSRRPNRKGLRNDRD
KPLPPLLARVSGNIEVLGFNARQRKAFLNAVMRYGMPPQDAFTTQWLVRDLRGKSEREFK
AYVSLFMRHLCEPGADGAESFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGQWS
MPWMMELTENKTASTAGSQPDSPSKTPSTGTPADTQPNTPAPDVVSKTEEGGKDVDKEKA
KNGDGEKDTTENKDNEVIAIPDEDDEASSISEDKGKDKEEKDKMPETSSDGDKADGKQDE
KEEEKAKSEDADEKTSDSKPKESEAEKETDTKVEKKDDEPEKMDTTPVTEEKKGQKDEKD
PGKTEEAGKLQNGESAKDSTAAAAAAEERKKAKTRFMFNIADGGFTELHSLWQNEERAAT
VTKKTNEIWHRRHDYWLLAGIIQHGYARWQDIQNDVRFAILNEPFKGEINRGNFLEIKNK
FLARRFKLLEQALVIEEQLRRAAYLNMTEDPSHPSMALNTRFSEVECLAESHQHLSKESI
SGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNILSRLASRG
PDTQSQQVQQ
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcagcgaggacgattttgaacatcggtctatgatgcaagacgatgatgacctg
gacgaggagttgtcagaaaatgatgccccaaaggtgaaaaagaagaagaaagccaaaaaa
agccgcgagagcaaaggcagcaagagaaaccgctcacggagagaggatatcgccatcagt
tctccggagccagtggaaggccctgatttggacgatggtgaagaagaccattcagatagc
gagggtagcgactacacacctggcaggaaaaagaagaaaagagccagcaccacaaaggac
aagaaaagaagcagctctggtgccgacagaatctcagcagcttccaaacggagggaacct
gaggaagaggaagacgaggatgatgacgatgctgagccaaaaagttcctctcagcttttg
gatacctggggtatggaggacatcgatcatgtcttcactgaggaagactataggactctg
accaactacaaagccttcagccagttcgtcaggcctctgatcgccgccaagaaccccaaa
attgccgtttccaaaatgatgatggttctgggagcgaagtggagggagttcagcacgaac
aaccctcttcggggttcggctgctgccaccacagccctggcggccgctagtgcctctgta
tcagttgaagctgcagaagaaagtccagtcacagcgcccacagcccaaatcagtgccgag
cccacaccagcagctcccatacgcaaggccaagacaaaagagggcaaggggcccaatgca
cgcaagaagtccaaacctgcacccaaacctcaagagaagaaggtgaagaccaaaaaggtt
gctcctctgaagatcaaactaggaggcttcagcagcaaaagaaaacgctcatctagtgaa
gaggatgatgttgacgtggacagtgacttcgatgatggcagtatgaacagtgtgtctgtt
tccaatggatcaaatagccgcagtagtcgcagcagcactaaaaagaagcccaaaaagaag
acgaaaaaaggtgatgatgatggtgatggatacgagacggatcatcaggattactgtgag
gtctgtcagcagggaggagagatcattctctgtgacacctgtccacgagcttatcacatg
gtctgcttggaccctgatatggagaaggcaccagagggcacctggagctgcccacactgt
gagaagatgggcatccagtgggaggctcgtgaggatgcatcagacggtgaggaggagaac
gaggtggttggtgaggcagaagaagacgaccatcacatggagttctgcagggtgtgtaag
gacggtggagagctgctgtgctgtgactcctgcccttcgtcataccacatccactgcctg
aacccacccctgcccgagattcccaacggagaatggatctgccctcgctgcacctgccct
actatgaaaggtaaggtgcagaagattctgacctggcgctggagtgaacctcctcctccg
acccctgtgcctcggcccagtgacctccctgctgatgctcctaaccccatgccattagct
ggtcgccctgagagggagttcttcgttaaatggcataatatgtcctactggcactgctcc
tgggtttctgagctgcagctggagatgcactgtcaggtaatgttcagaaactaccagcgt
aagaatgacatggacgacccccaacccgtagactttggtgttgagggagacgaggaaaag
agcgacaagaggaagaaaaaagaccccacctatgctcggatggaggagaagtactaccgc
ttcggcatcaagatggagtggatgatgattcaccgtatcctgaaccatagtgtggataag
aagaataactgtcactacctcatcaagtggagggatttaacttatgatcaggccacctgg
gaggcagatgatatggatctacccgagtatgacacctacaaactgcagtactggaaccac
agggagttgatgatgggtgatgaaggtaaaccaggaaagaaaattaaagtcaaaggaaag
gtgcgaaaactggaccgacctccagagaaccctgtcgtggatcccactattaagtttgag
cggcagccagattacctggacgccacaggcgggaccttgcatccgtaccagatggagggg
ctcaactggctccgcttctcctgggctcagggaaccgacaccatcctggcagacgagatg
ggtctgggaaaaaccgttcagactgctgttttcctctattcactgtataaagagggtcac
tcgaagggtccattcctggtgagtgcccccctgtccaccatcattaactgggagcgagag
tttgaaatgtgggctccgggtatgtatgtcgtcacatacgtcggtgataaggacagcagg
gctgtcatcagagaaaacgagttctcctttgagaacaatgccatccgcggtggcaagaaa
ccctctaggatgaagaaagaagcctcggtgaagttccatgttctcttgacctcctatgag
ctgatcactattgacacggctgttctgggctccatcgactgggcttgtttggtcgttgat
gaggcccacagactgaagaataatcagtcaaagtttttcagggtgctcaacaactacccg
ctgcagcacaagttgttgttgactggaactcctctacagaacaacttagaagagcttttc
catctgctcaacttcctcacaccagagagattcagtaatcttgagggtttcttggaggaa
tttgccgacattgctaaggaggaccaaatcaaaaagcttcacgacatgctgggaccacac
atgctcaggagactcaaagccgacgtgttcaagcacatgccttccaaaacagagctcatc
ctccgagtggagctcagccccatgcagaagaaatattacaagttcatcctgacccgcaat
ttcgaggctctgaatactcgtagcggaggaaaccaggtttctctactgaacgtcgtcatg
gatctcaagaagtgctgtaatcatccctatcttttccccgttgctgctatggaagctgcc
aagatacccaatgggatgtatgagggcagcaccctgactaaagcctctggcaaactgatg
ctactgcagaagatgctgcgtaaactcaaggagggcggacacagagtgctcattttctct
cagatgaccaaaatgttggacctgctggaagacttcctggagaatgagggctacaaatat
gagcgtattgatggaagcatcacaggaggcatgagacaggaagccatcgaccgtttcaat
gctcctggtgctccccagtttgttttcctgctgtcgaccagagccggtggattgggtatc
aacctggcgactgcagacacggttgtcatctacgactcagactggaaccctcacaatgac
attcaggcctttagcagagctcacaggattggtcaaaacaaaaaggtgatgatctaccgc
ttcgtgaccaaagcctctgttgaagagagaattactcaggtggccaagaagaagatgatg
ttgactcacttggttgtgcgtcctggattgggctcaaagaccggttcgatgtccaaacag
gagctggatgacattctcaagtttggtacagaggagctcttcaaagatgagggagaagga
gagaataaagaagaggacagcagcgtgattcactacgatgacaaagccatcgaccggctg
ctggatcgtaaccaggatgccacagatgacaccgagctccagagcatgaacgaatatctc
agctccttcaaagtggctcagtatgtggtcaaggatgaggaggaagcggaagaggaagtt
cagagggagatcatcaagcaggaggaaagtgtggatccagattactgggagaaactgctc
agacaccattatgagcagcagcaggaggatttggctcgtaatctgggcaagggcaagcga
atccgcaaacaggtcaactacaacgacggctctcaggaggacagagactggcaggatgat
caatctgatggccaatcagattattctgttgcttcagaggaaggagacgaggactttgac
gaacgaacagaagccaattcacgacgacccaacaggaaaggccttcgaaatgacagagac
aaacccctgccccccctgctggccagagtgagcggcaacattgaggtgttgggtttcaat
gctcgtcagcggaaggccttcctgaacgcagtgatgcgttatgggatgccgcctcaggac
gccttcacaacccagtggctggtcagagacttgcgtggcaaatcagagagggagttcaag
gcttacgtctcactctttatgcggcacttgtgtgagcctggcgcagatggagctgaaagc
tttgctgatggcgttccccgggagggactgtcacggcagcacgtccttactcggatcggt
gtgatgtcattgatcagaaagaaggtacaagagttcgagcatgtgaacggtcagtggtca
atgccctggatgatggagctgaccgagaataaaactgcatccactgccggcagtcagccc
gactcacccagcaaaacgccctctactggcactccagcagacactcagcccaacacacct
gctccagatgttgtttccaaaacagaagaaggtggaaaagatgtcgataaagaaaaagct
aaaaatggagacggtgagaaggacacaactgagaataaagacaatgaagtcattgccatc
cctgatgaagatgacgaagcgtcttctatttctgaagacaaaggcaaagacaaagaagag
aaagacaaaatgcctgaaacctcttcagacggagacaaggctgatggaaagcaagatgag
aaagaggaagagaaagcgaagtctgaagacgctgatgaaaagaccagtgacagcaagccc
aaagaatctgaggctgagaaggaaacagacaccaaagtagaaaagaaggacgatgaacct
gagaagatggacactacccctgttacagaggagaagaaaggtcagaaggacgagaaggat
cctggtaagacggaggaagcaggaaaactgcagaatggagagagtgccaaagacagtaca
gcagcagcggcagcagctgaagagaggaagaaagccaaaacacggttcatgttcaacatc
gcagatggaggatttaccgaattacactccctgtggcagaatgaggagcgagccgccaca
gttaccaagaagaccaatgagatctggcatcgccgccacgactactggctactcgctggc
atcatacaacacggttacgctcgttggcaagatattcagaacgacgtccggttcgccatt
ctcaacgaacccttcaagggagagatcaacagaggaaacttcctggagatcaagaacaag
tttctggccaggagattcaagctgcttgagcaggctctggtgattgaagaacagctgcgc
agggctgcgtatctgaacatgactgaagacccctctcacccctccatggctctcaacaca
cgcttcagtgaagtggagtgtctggccgagtcccaccagcacttgagcaaggaatccata
tccggaaacaaacctgccaacgccgtcctacacaaagtattgaaacagctagaagagttg
ctcagtgacatgaaagcagatgtcacacgtcttccggcgaccatcgccaggataccgccg
gtcgccgtgaggctgcagatgtctgaaaggaacatcctcagccgtttggccagcagagga
ccagacacacagtctcagcaggtccagcagtag
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integrated database retrieval system
