Carassius gibelio (silver crucian carp): 127935558
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Entry
127935558 CDS
T08819
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127935558
Spliceosome [BR:
cgib03041
]
Complex C
Other components
hnRNP proteins
127935558
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RBD_RDR6
RRM_5
RRM_occluded
DUF1866
Motif
Other DBs
NCBI-GeneID:
127935558
NCBI-ProteinID:
XP_052389506
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Position
A19:29329564..29343159
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AA seq
628 aa
AA seq
DB search
MAAEVNGSSGPVKEEEEPMDVTATHSENYQALLDAGLPQKVAESLDNIFQTGLVAYVDLD
ERALDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGNKVQESTKG
PDEVKIKALLERTGYTLDVTTGQRKYGGPPPEEVFTGPQPGIGTEVFVGKIPRDLYEDEL
VPLFEKAGSIWDLRLMMDPLTGQNRGYAFITFCSKDAAQEAVKLCDNYEIRSGKYLGVCI
SVANNRLFVGSIPKNKTRESILEDFGKVTEGLQEVILYTQPDDKRKNRGFCFLEYEDHKS
AAQARRRLMSGKVKVWGNPVTVEWADPVAEPDPEVMAKVKVLFVRKLAAPVTEELLESTF
SQFGKLERVKKLKDYAFVHFEERDAAVKAMQEMNGKELGGEEIEIVLAKPPDKKRKERQA
ARQTSRGPGYDDYYYYPPPRMPPPGRGRGRGGRGGYAYPPDYYGYEDYYDDYYGYDYHDY
RGGYDDPYYAYDDGYSMRGRGSGRSRGALPPPRARSAPPTRGRGGYPPRGGAPMGGGRGR
GGGRGGPFQAPRGRGSRGARGNRGGNVGGKRKADVFNQPDSKRRQTNQQNWGSQPIAQQP
LGSDYSSGYGYSNDSLEFSQDSYGQQWK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaggtcaatggcagctccggtccggtcaaagaagaagaggagcccatggat
gtgacggccacacactcagagaactaccaggcgctgctggacgctggcctgccacagaag
gtggccgagagcctggacaacatcttccagacagggctggtggcgtacgtggatctggac
gagcgggcgctggacgcgctgcgggagtttaacgaggagggagcactgtcagtgctgcag
cagttcaaggagtctgacctctcacacgtgcagaataagagtgccttcctgtgcggcgtg
atgaagacatacagacagagagaaaagcagggcaataaagtgcaggagtctacaaaaggc
ccagacgaggtcaagataaaggctctgctggagaggacaggatacactctagacgtcacc
acaggacagaggaagtacggcggccctcctccagaggaagtgttcaccggcccccagccc
ggcatcggcaccgaggtgttcgtggggaagatcccgagggacctgtacgaggacgagctg
gttcctctgtttgagaaggccggctctatctgggatctgaggctgatgatggatcctctg
accggtcagaaccgcggctacgccttcatcaccttctgcagcaaagacgccgcgcaggaa
gctgttaaactgtgtgataactacgagatccggtcgggcaaatatctgggcgtctgcatc
tctgtggccaacaaccgtctgttcgtggggtccatcccgaagaacaagacccgcgagagt
atcctggaggacttcggcaaagtcaccgagggcctgcaggaggtcatcctctacacgcag
ccggatgataagaggaagaaccgcggcttctgtttcctggagtatgaggatcataagtcg
gcggctcaggcgcggcgcaggctcatgagcgggaaggtgaaggtttgggggaaccctgtg
accgtggagtgggccgaccccgtggcagagccggacccagaggtcatggccaaggtgaag
gtgctgtttgtgcgtaagctggccgctccggtcacagaggagcttctggagagcactttc
tctcagttcggcaaactggagcgcgtcaagaagctgaaggactacgccttcgttcacttc
gaggagcgagacgccgcagtcaaggcgatgcaggagatgaacgggaaggagctggggggc
gaggagatcgagatcgtgctggccaaacctccagataagaagaggaaagagcgacaagct
gcgcgtcagaccagcagaggccccgggtatgatgactattattactaccctcccccccgc
atgcctcctccggggcgtggccgaggccgtggggggcgtggcggatacgcctaccctcct
gattactacggttacgaggattactatgacgactactacggttacgattaccatgactac
agaggcggttacgacgacccctactacgcttacgacgacggctactccatgagggggcgg
ggcagtgggaggagccgtggagctctgcctccccccagagcccgctcggctccgcccacc
cgcggcagaggtgggtatcctccgaggggcggggctcccatgggtggtgggcgtggccgt
ggcggggggcgtggcgggcccttccaggctcccaggggccgcggcagcagaggtgcgcgg
gggaaccgcggtggtaacgtgggcgggaagaggaaggcggatgtgttcaaccagccagac
tccaaacgccggcagaccaaccagcagaactggggctctcagcccatcgcccagcagccc
ctgggctccgactacagctccggatacggctacagcaacgactcgctcgagttctcccag
gactcctacggccagcagtggaagtag
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