Carassius gibelio (silver crucian carp): 127935591
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Entry
127935591 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127935591
04121 Ubiquitin system [BR:
cgib04121
]
127935591
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127935591
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127935591
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127935591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
C1_2
LRR_10
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
127935591
NCBI-ProteinID:
XP_052389559
LinkDB
All DBs
Position
A19:complement(22152961..22159469)
Genome browser
AA seq
313 aa
AA seq
DB search
MAEAAAATAAPRHRFFCHCCRGEIDPKLPEYVCPRCDSGFIEEMSENSSFLQSRDGAGAG
AAAVGDDDMASQFAELWQLLFMEHSALLSDPTVTDALRSRSGVEAAVGDPAPGTAGPVAS
VETLSDCTEPVLPPQQNSQQRNSRLDQGQAVEGMVQQFLSGLFSNSDSAGSQTSSWSSML
HSNPGDYAWGQGGLDAVITQLLGQSENTGPPPAGKEMISSLPIVSISTEQAACRLECPVC
REEYTEGESVRQLPCLHYFHSNCIVPWLQLHDTCPVCRKSLDGEDWSFQPQTGPSGAIPS
PMNVEERSTSETL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgctgctgctactgctgctcctcgacaccggttcttctgtcactgctgc
agaggtgaaatcgaccccaagctgcctgaatatgtttgtcccagatgtgactctggtttt
attgaagagatgtcagagaactcaagttttcttcagagtcgtgatggtgctggtgctggg
gctgccgctgtaggcgatgatgacatggcctcacagtttgcagagctgtggcagctgctt
ttcatggaacattcagccctcctctccgaccccaccgtcacagacgcgctccgcagccgc
tcaggggttgaagcagcagttggtgatcctgcccctgggacagcgggacccgtagcgtct
gtggagactttgtcagactgcacagagcctgtccttccccctcaacaaaacagccagcag
cgtaactctagactggatcagggacaggctgtggaggggatggtccagcagttcctttct
ggtctgttttccaattctgacagtgcaggttcccaaacctcctcatggtctagcatgctg
cactctaaccctggagattatgcttggggacaaggaggtttagatgcggtcatcacacag
ttgcttggtcagtctgaaaacaccggcccccctcctgccgggaaggagatgatctcatct
ctccccatcgttagcatctccacagaacaagctgcatgccggctggaatgccctgtgtgt
agagaggagtacactgaaggggaatctgtccgacagctgccctgtctgcactactttcac
agcaactgtatcgtgccctggctacaactgcacgacacctgccctgtctgccggaaaagt
ctggatggtgaagactggagtttccagccacagactggaccttcaggggcaattccatca
ccgatgaacgtagaggaacgtagcacctctgagactctttag
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