Carassius gibelio (silver crucian carp): 127935611
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Entry
127935611 CDS
T08819
Name
(RefSeq) iroquois-class homeodomain protein irx-1-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935611
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127935611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127935611
NCBI-ProteinID:
XP_052389642
LinkDB
All DBs
Position
A19:complement(10515871..10518897)
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AA seq
447 aa
AA seq
DB search
MSFPQLGYPQFLNASQELYGAERTAVMPSSPREGSSENSANPATAAVTPITPMLGMYANP
WTVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHAAPGFYPYSQYQYGDPS
RAKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKEN
KVTWGRSAEDRDGRIFDSDNDDDADKNDDEEEIDLETIDMDKPEEPRGDQNKESSDNQSE
REHVETPRILSSPSALKNTDSPMSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLA
ETATSPDNAQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLM
GVRSLLSQNTNIPNHSPVTNPENKTSSASGSPCLDSDNSSDSFSPKHNDQENLQRTESPT
LTSRPPFPVIHDRSHHETSQRALKTIS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagctgggttacccacagttcctaaacgcctcccaagagttgtacgga
gcggagcgcacggctgtcatgccgtcctctccacgcgagggaagctcggagaacagcgca
aatcccgcgactgcagcggtcactccgatcactccgatgctcggcatgtacgcgaatccg
tggaccgtgcaaaactacagcgccttcttaccttacaacagcgccgagctggccctgctc
tctcagatggggtcgcagtatgagttgaaggataaccccggggctcacccaccaggattt
gcagtccacgctgcgcccggcttctacccgtacagccagtaccagtacggtgacccgtcc
cgggccaagagcgctaccagagagaccaccagcacactgaaagcgtggctgcaggagcat
aaaaagaacccgtatcccaccaagggcgagaagatcatgctggccatcatcactaagatg
accctcacgcaggtgtccacctggttcgccaacgcgcgccggagactcaagaaggagaat
aaagtgacctggggtcgcagcgcggaggacagagacggacgcattttcgacagcgacaat
gacgacgacgcggacaaaaatgacgacgaggaagaaattgatctagagaccatcgatatg
gacaagcccgaggagcccagaggagaccagaacaaggaaagctcggataatcagagcgag
agagaacatgtagaaacaccgcggattttatcctcaccatcagcacttaaaaacacggac
agccctatgtcgagtagtaataaagagcagagtgttgtcaaaagcgttggtgaggtgtct
cctggtgggccggtgtgtcagaggcctgggaacagtaaacccaaaatctggtccttggcg
gagacggcgacgagtcccgataacgcgcagaagctcggtgtctcctcgacgcccgcgggc
ctcagggcctcaccctcgacccacccggctttcctctccactaacgggatttatacgtgc
cagattgggaaactacacaactgggcgagcgccgctttcctcagtgcaaattctctgatg
ggtgtgcgctcacttttgagtcagaacactaacatcccaaaccacagccccgttacgaac
cccgaaaataagacctcatctgcctctgggtctccttgtctagacagcgacaactcatca
gacagtttcagtcctaaacataatgatcaagagaaccttcagagaactgaatctccaaca
cttacgtccagaccaccgtttccggtcatccatgacaggtctcatcatgaaacatcacag
cgcgctctgaagaccatttcatga
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