Carassius gibelio (silver crucian carp): 127935741
Help
Entry
127935741 CDS
T08819
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127935741
03320 PPAR signaling pathway
127935741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935741
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127935741
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127935741
Nuclear receptors [BR:
cgib03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127935741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
127935741
NCBI-ProteinID:
XP_052389830
LinkDB
All DBs
Position
A19:complement(25861731..25883963)
Genome browser
AA seq
480 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPMTSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMNMFARNTEINSTVSMSGLHAVSSSDDVKPPYGLKPMS
AHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagcagagattctcgtagtccagacagctcatccgtttcctcaccaccatca
ggtcagcgttcgcccccgttggccccttcagctgccgccatgacttccctgccacccatg
acttcagccgtgaacagtcccatcagcagcatgggctcacccttctccgtcatcagttct
tctctgggttctccttgccttccaggaactccctctgtaggctacggccccatcagcagc
ccacagatgaacatgtttgccagaaacacagagatcaactccaccgtgtccatgtcggga
ctgcacgccgtcagcagctctgatgatgtcaaaccgccctacggattgaagccgatgtcc
gcccacagcccagggcccatggtctctcagaaacgcttgtgtgccatctgtggagatcgc
tcctctggaaagcactacggcgtgtacagctgcgagggctgcaagggctttttcaagcgc
actgtgaggaaagacttgagctacacatgcagagacaataaggactgtctggtggacaaa
cgccagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
agagaggtggtccaagatgaacgacaacgatccgttcaagaggagcgtcagaggaacaag
gagcgagagggagaggtggagtccaccagcgcagcgaatgaagagatgcccgtggagaag
attctggaagcagagatggccgtggagcagaagactgagctgcatgcggatggcagctca
gggggaagctctccgaacgacccagtcacaaatatctgccaggcggctgataagcagctg
ttcactttggtggagtgggcaaaacggatccctcacttcagtgagctgtctctggatgac
caggtcatcctgctgcgagctggctggaatgagctactgatcgcgtcattctcccatcgc
tccatcacggtgaaggatggcattctgctggccaccggcctccacgtgcacaggaacagt
gctcacagcgcaggggtgggagccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggttctgacggagctggtgagcaagatgagggacatgcagatg
gataaaaccgagttgggctgcctgagagccatcatcctcttcaacccagatgcaaaggga
ttgtcaagcccgagtgaagtggagttactgagagagaaggtctatgcatcgctggaggct
tattgtaaacagagatatcctgaccagcagggcaggtttgccaagctcctcctccgactg
ccagcgctgcgctctattggcctaaagtgcctggagcacctgttcttcttcaagctgatt
ggagacacccctatcgacaccttcttaatggaaatgcttgaagctccacatcagctgacc
taa
DBGET
integrated database retrieval system
