Carassius gibelio (silver crucian carp): 127935803
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Entry
127935803 CDS
T08819
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127935803
04081 Hormone signaling
127935803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935803
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127935803
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127935803
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
127935803
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRAME_N
Motif
Other DBs
NCBI-GeneID:
127935803
NCBI-ProteinID:
XP_052389946
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All DBs
Position
A19:4474340..4587198
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AA seq
415 aa
AA seq
DB search
MSEQGDKCTSRWKDDPMQNGYVPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRREEQQKTVWERPEPTQEEWELIRGVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFCTSDQSAVGVKEAKPEDIGSAPIINAPEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcacctcccgctggaaagatgatcccatgcagaatggg
tacgtaccaagttatctggacaaggatgagctgtgtgttgtgtgtggggacaaagcgact
ggatatcattaccgctgcattacctgtgagggctgcaaaggtttttttcgccgcacaatt
cagaagaacttgaaccccacatatgcgtgcaagtacgagggcaagtgcgtcattgacaaa
gtcacccgcaaccagtgccaagagtgtcgcttcaagaaatgcatcgctgttggcatggca
acagacttggtgttggatgacagtaagcgtctggccaagcggaagctgatcgaggagaac
cgtgagcggcggcggcgcgaggagcagcagaagacggtttgggagcgacccgagcccacg
caggaggagtgggagctgatccggggcgtcaccgaggcccatatggccacaaacgcccaa
ggcaaccactggaaacagaagcgcaaattcctggtcgaggaagcaatgctacttaatgaa
ataacatgtaatttattctgtacttctgaccagagtgcagtgggggtgaaggaagccaag
cccgaggacatcggttctgcacccatcatcaacgcaccagaggggagcaaagtggacatc
gaagccttcagtcagtttacaaaaattatcacccccgccatcactcgtgttgtggatttt
gccaaaaagctgcccatgttctgtgagctgccttgtgaggaccagatcattttgctgaag
ggctgctgtatggagatcatgtccctgcgagcggcggtgcgttacgatccagagagtgag
actctgacgctgaacggggagatggcagtcacacggggccagctcaagaacgggggtctg
ggcgtggtctccgatgccatctttgatctgggcgtctcgctgtcatccttcaacttggat
gattcggaggtggcattgctacaagccgtgattctgctttcctccgatcgtccaggttta
acgagcgttgaacggatagagcgctgtcaggaggagttccttttggccttcgaacattat
atcaactaccgcaagcacaaggtggctcacttctggcctaagctgctgatgaaggtgaca
gatctgcgcatgatcggtgcctgccatgccagccgcttcctgcacatgaaggtggagtgt
cccacggagctctttccgcccctcttcctggaagtgttcgaagactga
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