Carassius gibelio (silver crucian carp): 127935907
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Entry
127935907 CDS
T08819
Name
(RefSeq) peroxisome biogenesis factor 1-like
KO
K13338
peroxin-1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127935907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127935907
Membrane trafficking [BR:
cgib04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
127935907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
AAA_22
TIP49
AAA_18
AAA_28
ABC_tran
RNA_helicase
AAA_25
AAA_5
DUF815
AAA_33
Sigma54_activ_2
RuvB_N
NACHT
AAA_2
ATP-synt_ab
AAA_29
Viral_helicase1
AAA_lid_PRS2_C
Vps4_C
nSTAND1
APS_kinase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
127935907
NCBI-ProteinID:
XP_052390087
LinkDB
All DBs
Position
A19:13179181..13189094
Genome browser
AA seq
1246 aa
AA seq
DB search
MLGSQGIQPVTLDFNNSKNCFLQLSSNFATHLCLQENQILELSWGVSAPVFLSWITSRSS
GPEDRVEISRQLGEKLGLKEGEQGYLRPCHQVQSVQQVFVEPLSPDDWEILELHSMALEQ
RLLDQIRVVFSEGVFPVWVDQHTVIYIRIASLSPSVPFGRLEQFTELVVSPKLHPEGEQL
LQTRSEEPSQDLQNQNIDVTSSSSSLVHQDPISGHLESPNEGHWGGIADLKSLVRYLFAG
GFEPAKEHVAVPTVPTILKDCILRTCGTPPRSVSHLGSCHGDVHILPWNLQEQENWNPGQ
SALTYGRLSKILSPKELREKVKQAMEKKKIRDGPHKGNDTEEHKENAVVVRMLCHNIKRL
QEDQKFKKCEDIYSGRVWIPKVLQRRLRIDPRSAVRIQPLKSKPRVAEAVMVQPLQPLAV
NEKEDDIQTAFLNWLHALSHQPLTCLTGRTNVIFLPCAEGKEEFVLTVLKPEQQQEDEMF
FLSASLLKKSNLQIVREPDDSDHSGSDNDSEDPHLGFPSLSSLGGVEDISRSAFEHISHA
LMGGPLSRELVFTGRGLRGGALLITGAKGSGKSSLSRALCRKASEELDAHVQVVDCKTLK
GKRADKIRLRLEEVFEQAIWRQPSVVLLDDLDHVTGAAASPEHEHGPEAVLRQHIAQGLR
DLVDEMVVRSSLIALMITAQSENALHQTLTAVQGSHFFQSFCKIQTPDQIQRVEILRSLI
TKKNFQDCPTTLDLDIVARETEGFMPQDLHLLLERAIHANSLHSRNNGSSEDLNYEDFRQ
ALQGFTPPSFWGAQLQAPTGAGMERIGGLHQARQLLMDIILLPAKYPLLFSSLPMRQCSG
VLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCI
LFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAATSRPDLIDPALLRP
GRLDKSLYCPPPDREARLEILKALTHSVPLAADVDLEQIVEATELFTGADLKALLYNAQL
EAIHSSLGPNLLHDLGSGSDSDVSLSSLIFLNHSGGSDDSAGEGDAGPEHSMVLLGPSEL
PPEDPRHNIWRLYFGSSFESELDNQSLSELNSQCLSGPNSTAPDMTGASVRDPNSCHVPV
FMSCLQDGFQELTHEQSERLRADVNTVKNSYRRNTDESSLAQTGPSKPGSLICQAHLISA
LANTRASVSREDWRRYTELYESFGASKEGKSQSNASFKAGQRVTLA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagtcaggggattcaacctgtcacgctagacttcaataactccaaaaactgc
tttcttcagctctcatcaaactttgccacgcatctctgtcttcaagagaaccagatcctg
gagctgtcatggggtgtttctgcacccgtgttcctcagctggatcacctccaggtcttca
ggtccagaggacagagttgagatcagcagacagctgggagagaaacttgggctcaaggag
ggagaacaggggtatctgcggccgtgtcatcaggtgcagtcagtgcagcaggtgttcgta
gagcctctgtctccagatgactgggagatcttggagctgcacagcatggctctggagcag
cgactcctggatcagatccgagtggtcttcagtgagggtgtttttcctgtgtgggtggac
cagcacactgtcatctatatcaggatagcgtccctctctccatctgttccgtttggccga
ctggagcagttcactgagcttgttgtctccccaaaactacatccagaaggtgaacaactg
ctccaaactcggtcagaagaaccaagccaagatctacaaaaccagaacattgatgtcaca
tcttcctccagctcactcgtccatcaggatcccatcagtggtcatctggagagtccgaat
gaaggccattggggaggaatagctgatctgaaaagcctggttagatacctttttgcagga
ggatttgagccagcaaaagagcatgtcgcagttcccacagttcccaccatcctgaaagac
tgtatcctccggacctgtggaacccctcctaggtctgtcagccatctaggctcatgtcac
ggagatgtccatatactgccatggaacctgcaagagcaagagaactggaatccagggcag
tctgcactaacatacggcaggctttcaaagatcctttctcctaaagaactcagggagaaa
gtcaagcaggccatggagaagaagaagatcagagatggacctcacaaagggaacgacaca
gaggaacataaggagaacgccgttgtggtcaggatgctttgtcacaatataaaaaggctg
caggaggaccagaaattcaagaaatgtgaagacatttactctgggagagtttggattcca
aaggtgctgcagaggcgtttgaggatagaccctcgatcagctgtgaggattcagcctttg
aaatcaaagccaagagttgcagaagcagtcatggtgcaaccattacaaccgctggcagtg
aatgaaaaagaagacgacattcaaactgcattcctcaactggttgcatgctctgagccat
cagcctttgacctgtctgacaggccgcactaacgtcattttcttaccctgtgccgaagga
aaagaagagtttgtcttgactgtgctgaaaccagagcaacagcaagaggatgaaatgttc
tttctatcagccagtttactaaagaaatcaaatctgcagattgtcagagagccagatgat
tctgatcacagcggctctgataatgatagtgaagatccacatctcggctttccctccctc
agctctcttggtggggtagaggacatcagcaggtctgctttcgagcacatctctcacgct
ctaatgggaggtcctctctcgcgggaactggtcttcacaggacgtggactgaggggcgga
gctctgctcatcacaggggcaaagggcagtggaaaatcttctctctccagagcactgtgt
cgaaaggccagtgaagagctagatgcccatgttcaagttgtggactgcaagacactgaaa
ggtaaaagagccgataaaatcagactgagactggaagaggtttttgagcaggcgatctgg
agacagccctcagtggtcctgctggatgacctggatcacgtgactggtgccgcagcttca
cctgagcacgagcatggaccagaggcagtactgcggcagcacatcgcacagggtctgagg
gatttggtggatgagatggtggtgcgctccagtctcatagctctgatgatcacagcacag
agtgaaaatgctcttcatcagactctgactgcggtgcagggttcacatttcttccaaagt
ttctgcaagatccaaacaccagatcagattcaaagggttgagattctaaggtctttaata
accaaaaagaacttccaagactgtccaactactcttgacctagacattgttgccagagaa
acagaaggattcatgccacaagacctgcacctgcttctcgagagggccatccatgccaac
tccctacacagcaggaacaatggcagctctgaagatttaaactatgaagacttcagacag
gccctacagggcttcaccccaccctccttctggggggctcagctgcaggctcccaccggg
gccggcatggagcgtattgggggacttcatcaggcacgtcagctcttgatggacatcata
ctgctgccagctaagtacccgctgctcttctccagtctgcccatgcgtcagtgctccggt
gtgctgctctatggagctcctggaacaggcaagactctactggctggagctgtagccaaa
gagagcggcatgaacttcatcagcatcaagggtcccgaactcctgagcaagtatattggc
gcaagtgagcaggcggttagagatgtgtttcagagggctcaacaagctaaaccttgcata
ctgttctttgatgagtttgactctctggcccctcgaaggggtcatgacaacacaggggtc
actgaccgtgtagttaaccagttacttactcagctggatggagtggaagggctgacaggg
gtgtatgtgttggctgccaccagtcgtcctgacctgattgatcctgctcttctgagaccc
gggcgactggacaagtctctctactgccctcctcctgatcgggaagcccggctggagatc
ctgaaggctttgactcattccgtgccactggctgcagatgtggacttggagcagattgtt
gaggcgacagagctgttcactggagctgacctaaaggcccttctttataacgctcagcta
gaggcgatccacagcagcctggggcccaaccttctgcatgatctgggctcggggtcagac
agtgatgtcagcctctcctccctgatcttcctgaaccatagcggtgggtcagatgactca
gctggggagggggacgcagggccggagcactctatggttctgctgggccccagtgaactc
ccacctgaggacccacgccacaacatctggcgcctttactttggaagctcctttgagtct
gaactggacaaccagtctctatctgaactgaattctcagtgcctgtctggacccaattct
accgcccctgacatgaccggggcatcagtgagggatccaaactcctgtcatgtgccagtt
tttatgtcctgtctgcaggacggctttcaggaactgacccatgagcagtcagaacgcctc
cgagcagatgttaacaccgttaagaacagttaccgcagaaacacggatgaatcatctctg
gcccagactgggcccagtaagcctggctctctcatatgccaagctcacctgatctccgct
ttggctaacactcgagcatctgtcagcagagaagactggaggagatacactgaactatat
gagtctttcggagcctcaaaggaaggcaagtctcagagcaatgcttcgtttaaagcaggt
cagcgggtgacattggcttaa
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