Carassius gibelio (silver crucian carp): 127935910
Help
Entry
127935910 CDS
T08819
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127935910
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127935910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
127935910
NCBI-ProteinID:
XP_052390089
LinkDB
All DBs
Position
A19:complement(12618462..12630994)
Genome browser
AA seq
469 aa
AA seq
DB search
MRQWCLPAVAPRAEPLPTGRLSPHISDERMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALESLERLDPDHRTPCCNNHSAPPSAPTSAAPAAPSSSSSSFSSLTSATTQTPVMDAA
LSPSNSYDASPPPMYPPSGVQRSFSYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKSFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSENQHAQ
VPRSRTDTPLNRQRELLMHLLPWYSAHQSQSGATLSVRSLVKEEPDWRFAGSPAERAAVG
PFRLRRGSRFTWRKECQSIMESFFTENQYPDEAKREEIANACNSVIQKPGSKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSINEEVETQEFGDQIMSRRFS
EQEELSRRKDIELEGDMLHPVEVVIPSSPTSQLMEQKLDESKREATDDD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgtcttccagctgtggctccacgcgccgaaccgctcccaaccggccga
ttatcacctcatatctcagatgaaaggatggagtgttgtgatgtggagccacgctatacc
attgaacagatcgacctgctccagcgtttaaggctgtcagggatgaccaaacctcagatc
attcaagcccttgagtctttagagaggcttgatccagaccatcgtaccccatgctgcaac
aatcactcggccccacccagcgcccctacctccgcagcccctgctgctccctcatcctcc
tcttcttccttctcctctcttacctcagccaccacacagactcctgttatggatgctgca
ttatcgccaagcaacagttatgatgcttcgcccccacccatgtacccacccagcggagtt
cagaggtcgtttagttacgacttggcagaagaggactgggatctggaggagaaggtggag
gaatacatgaggagggacagcaacctcgtgaaagaagagataaagtcttttctcaataac
agaaggatctcacaggcaattgttggacaagtcacaggtattagtcagagctacatctcc
cagtggcttctgcagcaggggctggagatgagcgactccaaacgcagggcgttctatcgc
tggtacctgctggagcgcaacagcccaggaatcagatggagtgaaaaccagcatgctcag
gtccccaggagcaggactgacactcctttgaataggcagagagaactgctgatgcacctc
ctcccctggtactctgctcaccagtcccagtcaggggccacattgtccgtgcgttctctg
gttaaagaggagcctgactggagatttgctggaagtcctgcagaaagggcagctgttggg
ccttttagactacgtagagggagtcgcttcacctggagaaaggagtgtcagtcaatcatg
gagagtttctttacagagaatcagtatcccgatgaagccaaaagagaggaaattgccaat
gcttgtaattctgtcattcagaaacctggaagcaaactgtccgaatttgaacgagtcact
gctctcaaagtgtacaactggtttgcaaatcggaggaaggagatgaagagacgtgcaaac
atagaggctgctatactagagagccatgggatagaggtacccagccccagctgccactcc
atcaacgaagaggtcgagactcaggagtttggagatcaaatcatgagtcggcggttctct
gagcaggaggagctgtctcggaggaaagacatcgagttagaaggagacatgcttcatcct
gtggaagtggttattccttcaagcccgacctctcaactcatggagcaaaagctggatgaa
tcgaaaagggaggctactgatgatgattaa
DBGET
integrated database retrieval system
