Carassius gibelio (silver crucian carp): 127938058
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Entry
127938058 CDS
T08819
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127938058
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127938058
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Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
127938058
NCBI-ProteinID:
XP_052390412
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All DBs
Position
A20:complement(17287227..17292711)
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AA seq
431 aa
AA seq
DB search
MSSDEERSMAGGSGNGKLRQWLIEQVDTGKYPGLVWENEEKSIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYK
IVPEGSKKGSRSLEDSPSNSSSPSYPVHPPYPPASSQVCNYLSPADRGWRDYSTISEISY
SQSPYSSRWDPGYQFSGSFYSCNASDPQLSPFTLDTSMRSAEAMALSDYRLHVVVFYRDT
LVQEVTVSSPEGCQLGPSRQGQAYASPGAPELVELPHAEGASLERGVILWMAPDGLYARR
RCPCRVYWEGAHAPPTDKPNKLEREQNCKLLDTHLFITELQSYALHTRPAPCSQVLLFFE
DESTDTQRPRRTFTVQVEPLFARQLLFLTHPGSMNYIRSHELSHLPPEHTLSPTQDYHRV
ITHHHNNGPQN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagatgaagagcgctcgatggcggggggctccggtaacggaaagttgcgtcag
tggctgatagagcaggtggacaccggaaaataccctggactcgtgtgggagaacgaggag
aagagtatctttcggattccgtggaagcacgcgggtaaacaggactacaacagggacgag
gatgcggcgctcttcaaggcttgggcactattcaaaggcaagtaccgtgagggtatcgac
aaacctgacccaccaacctggaaaacacgtcttcgatgtgctcttaacaagagcaatgac
tttgaggagcttgtggagcgcagtcagcttgacatatcagacccatataaagtgtataag
attgttccggaaggatccaaaaaaggatccagatctcttgaagattcaccgtccaattca
agctcacccagttatccagtacacccaccttatccaccagcatcatcccaggtgtgcaac
tatctttctccagcagacagaggatggagggattactccaccatctctgagatctcttac
agccagagcccctactcctcacgctgggacccagggtaccagttcagtggctctttctac
agttgcaatgcatctgatccacaactgtcacccttcaccctggacaccagcatgagatct
gctgaggctatggccctctcagattaccgtttacatgtggtggtgttttaccgggacact
ctggtgcaagaggtaacagtgagtagtccagagggctgtcagctgggccctagcagacag
ggacaggcctacgcttcacctggtgccccagaactggttgaactccctcatgctgaaggg
gcatctctggagcggggcgttatactctggatggcccctgacgggctctacgcccgccgc
cgctgcccctgcagggtgtactgggagggagctcacgcaccacctaccgacaagcccaac
aaactggagagggaacagaactgcaaactgctggacactcatctgttcattacagagttg
cagagctatgccttgcacactcgtcctgcgccatgctcccaagtgctgctgttctttgag
gatgagagcaccgatactcaaagaccaagaaggaccttcacagtgcaggttgagccactg
tttgcccgccagcttcttttcctcacccaccctggcagcatgaactacatccgcagccat
gagctttcacacctgccccctgaacacaccctctccccgacccaagactaccacagagtc
atcacgcatcaccataacaatggccctcaaaactga
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