Carassius gibelio (silver crucian carp): 127938204
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Entry
127938204 CDS
T08819
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127938204
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127938204
09142 Cell motility
04820 Cytoskeleton in muscle cells
127938204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
127938204
NCBI-ProteinID:
XP_052390599
LinkDB
All DBs
Position
A20:3891359..4063229
Genome browser
AA seq
3215 aa
AA seq
DB search
MNRLCFLVFFGLLWRCGGAQQRGLFPAVLNLASMAEITTNATCGETGPEMYCKLVEHVPG
RPVKNPQCRFCNLKSDYDYERHPIEYAIDGTNRWWQSPSIMNGMDYHHVTVTLDLQQVFQ
IAYVILKAANSPRPGNWILERSLDGETFMPWQYYAITDTECITRFNIVPRTGPPSYMHDE
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPVLLNFTSARFIRLRFQRIRTLNADL
MTLALNDPRDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPVNPHNKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCQKCNCHGKSEECYYNQTVADAKLSLNIHGEYEGG
GVCLGCSENTGGINCQSCVDGYYRPTELHPNESWPCRPCSCDLRGSLHSACVPDESQATA
GLAVGSCICKQGYMGEKCDRCAFGYTGFPLCERCNCSRDGSVNQDPCLTPCVCKEHVEGQ
NCDRCKQGFYNLREDRPSGCEKCYCSGLASLCAESHWDYSNVMDMSGWYLTGADGEGHVW
AVPSRETAHQLTVSQSEAQTHLTTPYYWSAPSAYLRKKLLAYGGWLEYSLSYDTESKDGP
VRILSAPDVIIEGGGLRLIDSSSGVVVYPFSTAERRIDLLPESFLHQASRLPVSKRDFHN
VLNNIERLLIRASYAQEHSAIYRLGRVSMSVAAEGSGSGVQASAVEVCQCPPSYDGTSCE
TCAVGFRRVNGTLYRGVCEFCQCHGHTEHCDAITGHCLGCRDHTTGPYCDQCAPGYYGDT
TRGTAEDCQPCACPLLNPSNNFSPTCHVDVRGEVICDRCQPGYTGARCDRCANGYFGHPN
VPGGSCQRCMCNGNLDLTAELSCDPVTGACLRCHEGYGGLDCGRCADGFFGDALIAKNCQ
ACQCHSNGSLSDSCHQETGQCQCRQHVVGRQCDECMPNCWWDSEAELCRPCQCSARGSVS
QRCDSEGRCICRAGYLGRRCDLMRPPHARRETRRPVQQVPIQNIQRWESRGGCPRGAYRP
GTGSGLHMHGAQGCVPCHCSSFGSKSFDCDESGQCRCQPGVTGQKCDRCAPGHFSFQEGG
CTSCQCAHVGNNCDANTGQCICPPNTVGERCDKCAPNHWGHDISSGCKPCGCNALGSVAQ
QCNVNTGCCMCHEQFRGEKCDECKLGYRDFPQCISCQCSAAGSSLDTCDAESGLCACADR
SGQCSCKANVEGVKCDRCKVGSFGLSHRNPLGCSQCYCFGLSSSCTEATGLIRMRLTLMP
EQTVLPLVDKSSHQEITAGVSFQHPDIIANADVIQQHLSEPYYWRLPKQFKRSMITAYGG
KLKYAIYYEARDETGRTSYEPQVIIKGGANKDKLMVRHMPALQIGQLTRHEIDITEHEWK
HKDDRPMSREDFMDVLFHVEYILIKASHGSVMRHSRISEITLEVAEVGTPSKDSEIAHQI
EKCDCPLGYAGLSCEECAAGFYRLSVHAGGAASRAGFGSCVRCQCNGHSDSCDPETAVCQ
NCQHNTVGDKCERCAAGFYGIMRGSPDDCKRCACPLLNQENNFSPTCQAEGFNDYRCTAC
PEGYEGKHCERCAPGFHGKPSVLGGRCEECKCHPYSSFPTACDPRSGQCQCRPGASGLKC
DRCMERHVCGPEGIVSCDDDCAGLLIRDMERLLRLIGSVNLTLPLPLPYRVLYRYENMTE
ELKHMLSPQRAPERLLQLADSNLGSLVTEMDELLNRATKVSADGEQTAADAERSRKGAED
LERYVRNTLLAAEALRDKARELNATLGSREGASEKSVNEMNDEIQAMLAELRKRQLSGKK
NIADEELGAADALLARVKRLFGDPHQATEDLKKEVSDKMGDYRQKLDDAQDLLRDAHNKT
KQAERLAANNHQILERLQGKRDAAGKQKKETEGILAEGEKMLDEANALSDNINRGKEELE
EMERELGPLHVQLDIKVGRMGQGLDDSIPELLLRAEDHAGQLNESAAILDSILAEAKNLS
FNATAAFKAYTNIKNYIDEADKEAKEAKKASIDALQLASGPKGSLKDQAKGSLQKSHRLW
NEAKELQNDVKENGDNLGALQFRLKGANKKNKDLQKGLNDTMEKLNAIPDDLAVKIQATK
LKAAEANDTAVDVLNRLKDLNLNLMGLKRNHSKLEDDVKTANNLIKDPEKNIHAAGAKVK
DLENEADRLLEKLKPIQELQDNLKKNISQIKELINQARKQANSIKVSVSSGGSCIRTYRP
EIKKGRYNTIILHVKTLAADNLLFYLGSAKYVDFLAIEMRKGKVNFLWDVGSGVGRVEYP
DLVINDGNWHRIEASRIGLNGSILVHALEGPKTGILPTLRSAKSPESYTVLDVDQNAYLF
VGGMLGSVKKADAVKTTTFSGCMGETSLDGKPIGLWNYRQRDGDCAGCVVSPQPADTEGT
VQFDGEGYAAVSRPTRWNPNVSTVMFKFRTFSTDALMMYFATKDMKDFMSAELRNGKVKV
SYDLGSGTGSIISDKRYNDGKWKSFTMSRMKKEATIAIVNIDANEQEQLRVASPGGATGL
NLREDERMYFGGVPKTGNYRSEVVLKRFSGCMKDIEVSRTPYNLLSSPDYTGLTKGCSIE
NLHTVSFSRPGYMELKPVSFDVGSEISLSFSTKSENGIILFGRGALTSTMHLRQGLKPVQ
TPRRSRRQTGEPFLSVQLNKGALEVLVFTGSKSPHRASRKANKGILHDGREHSLRIQRLS
GALFTVQVDEEPLFQQQLPNDHPLSIQRLFIGGIPADIETGVQRPNVPFEGCIWNLLINT
VPVDFSQPVAFENAEIGQCPDLAPPPPPPETPEEEEEEETTAKPELIPTEAARPPPAAST
ATPLPQATPITDTPTRVNGAAVSCAAEAEPVVLELAKQFGLSRNSHMAFEFDDRTVKNRL
IMEFEIRTEASSGLVFYMARINHADFATIQLKEGMAHLSYDLGSGNTSVSVPRIINDGQW
HKIRVTREKQRGILVIDGRYSKHTTSPKKADILDVVGMLYVGGLPLNYSTKRIGPVLYSI
DACIRNFKMMTLPLDMEKPTSSYRVGSCFANPEKGTYFDGTGYAKAVDTYRVGNDVSVDL
EFRTSQSSGVLLGVSSQKMDGLGIELVNGKLLFHADNGVGRITAVYEPDREAGLCDGQWH
TVSAHKLKHRLELTVDGKKSEAASPDVRSASADTNDPVYVGGYPEGLKQFGLTINTPFKG
CMRNVKITKAGKTLEVQMNKVLELRGVQPLTCPAR
NT seq
9648 nt
NT seq
+upstream
nt +downstream
nt
atgaacagactgtgttttctcgtgttcttcgggctgctgtggcggtgtggtggagctcag
cagagaggtctctttccagctgtgctgaacctggcctccatggcagagatcacgaccaat
gccacgtgtggagaaactggaccagaaatgtactgcaaactagttgagcacgtaccaggt
cggcccgtgaaaaaccctcagtgtcggttctgcaacctgaagagtgattatgattacgag
cggcatcccatcgagtacgccatcgacggcactaacagatggtggcagagcccgagcatc
atgaatgggatggactaccatcacgtcactgtgactctggacctgcagcaggtcttccag
atcgcttatgtgatcctgaaagctgcaaactcccctcggcccggaaactggattctagaa
cgttctctggatggtgaaacatttatgccgtggcagtattacgcgattacagacacagag
tgcatcacacgcttcaacatcgtccccagaacaggcccgccgtcctacatgcacgatgag
gaagtcatctgtacttccttctactctaaaatccatcctctggagaatggcgagattcac
acctcactaataaacggccgtcccagtgcggatgatccatcgcctgtgttactcaacttc
acctcggcacgctttatccgcctgcggttccagaggatccgcaccctaaatgctgacctc
atgaccctcgccctcaatgacccccgagacatcgaccccattgtcaccagaaggtattac
tactccattaaggatatatcagttggaggcatgtgcatctgttacggtcacgccaaggcc
tgccctgtcaacccacacaacaagaaattcagctgtgagtgtgaacacaacacttgtgga
gagagctgtgaccgctgttgccctggttacaaccagaaaccctggatggcgggaaccttc
ctcacacgccacgtctgtcaaaagtgtaactgtcatggcaaatcagaggaatgctattac
aaccagactgtggccgatgccaagctgagtttaaatattcatggtgaatatgaggggggc
ggagtctgccttggttgctctgaaaacacaggaggaattaactgtcaatcatgtgtagat
ggctactacagacccacagagttgcatccaaatgaaagctggccctgcagaccctgctca
tgcgacctgagaggttcactgcactctgcatgtgttccagacgagagccaggccaccgca
ggtttggcagtgggctcgtgcatctgtaagcagggatacatgggtgagaagtgtgacaga
tgtgcgtttggatacacaggattccctctgtgtgagcgatgcaactgcagcagagatggc
agtgttaaccaggatccctgcctgacgccctgtgtgtgtaaggagcatgtggagggacag
aactgcgaccgctgtaaacagggattctataatctccgtgaagaccgtcctagtggatgc
gagaagtgctactgttctggtctagccagcttgtgtgctgaatcccactgggactacagt
aatgtgatggatatgtctggatggtatctgacaggagcggatggggaggggcatgtgtgg
gcggtgcccagcagagagacggcccaccagctcaccgtcagccaatcagaagcacagacc
cacctgacaacaccgtactactggagcgccccgtctgcttacctgcgcaagaaactcctg
gcttacggaggctggctggagtattcgctctcttatgacacagaaagcaaagacggcccc
gttcgcatcctcagcgctcctgatgtcatcatagagggcggtgggctgaggttgattgac
agcagctctggggtcgtggtgtatccgttctccacagctgagcgcaggatagatctcctg
cccgaaagctttctgcatcaagcctcaagactgcctgtcagtaagagagacttccacaat
gtcctcaacaacattgagcgtctgctgatccgggcctcctacgctcaggaacacagcgcc
atctacaggttgggccgtgtgagcatgagtgttgcggctgaaggctctggcagcggtgtt
caggccagcgctgtggaggtatgccagtgtcctcccagttatgatggcacttcatgtgag
acatgtgcagtgggcttccgcagagtgaacgggacgctgtatcgtggcgtgtgtgaattc
tgtcaatgccacggacacacagagcactgtgacgccatcactggacactgcctgggctgt
agggaccacacgacaggaccgtactgtgatcagtgtgctcctggatactacggagacacc
accagaggaactgcagaagactgtcagccatgtgcttgtcctcttctgaacccgtcaaac
aattttagccccacgtgtcacgtcgatgtcagaggagaggtgatctgcgatcgatgccag
ccgggttacacaggtgcacgctgtgacaggtgtgctaatggctatttcggtcatcccaac
gttcctgggggttcctgtcagcggtgtatgtgtaacggtaacctggatcttacagcagag
ctcagctgcgatccggtgaccggcgcctgtctgcgctgtcatgagggatacggaggactg
gactgtggaaggtgcgctgatggattctttggagacgctctcatagccaagaattgccaa
gcgtgtcagtgtcacagtaacggatcgctctcagactcgtgccatcaggagaccggacag
tgccagtgtcgacaacatgttgttggacgtcagtgtgacgagtgcatgccgaattgttgg
tgggacagtgaggctgagttgtgtaggccgtgtcagtgcagtgctcggggctctgtgtcc
cagcgctgtgactctgagggcaggtgcatctgtcgggccgggtacttgggccgcaggtgt
gacctgatgcgcccgcctcacgcccgcagggagacccgccgacccgtccaacaggttccc
atccaaaacatccagagatgggagagcagagggggctgccctcgaggggcgtaccgcccc
ggcacagggtctggtttacacatgcacggcgctcaaggctgcgtcccatgccactgcagt
tcattcggatcgaagtcgtttgattgtgatgagagcggtcagtgtcgctgtcagcctggt
gtgacaggacagaagtgtgaccgctgcgctcccggacacttcagcttccaggaaggcggc
tgcacatcgtgccagtgtgcccatgtgggaaataactgtgatgctaacacaggtcagtgt
atctgtccgcccaacaccgtgggagagagatgtgacaaatgtgcgcccaaccactggggt
cacgacatcagcagcggctgcaagccatgtggttgtaacgcactggggtctgtggcgcag
cagtgtaacgtgaacacaggctgctgcatgtgccatgagcagttcaggggtgagaaatgt
gacgagtgtaagctgggttacagagactttccacaatgcatttcctgccagtgctcagcg
gcaggctcgtcactggacacctgcgatgcagagtctggtctctgcgcatgtgcagacaga
agtggccagtgctcatgcaaggctaacgtagagggagtgaaatgtgaccgctgtaaggtg
ggctcgttcggcctcagtcacaggaatccactaggctgcagtcagtgctactgtttcggc
ttgagcagctcatgtacagaggccacaggactcatccgtatgaggctgactctgatgcca
gaacagaccgttcttcctcttgtggacaaatccagtcatcaggagatcacagcgggtgtg
agcttccagcatcctgacatcatcgctaatgctgatgtgatccagcagcatctgagtgag
ccgtactactggagactgccaaaacagttcaaacgctccatgataacagcctatggtggg
aagctgaagtatgccatatattacgaggctcgtgatgagacgggccgcacctcttacgag
ccccaggtcatcataaagggcggagccaacaaggacaagctcatggtccgccacatgcca
gcacttcagattggccagctgacccgtcacgagattgacataacagagcacgaatggaaa
cacaaggatgacaggccaatgtctcgtgaggatttcatggacgtgctgtttcatgttgaa
tatatcctaataaaggcctcgcacggcagcgtcatgagacacagcaggatttcggagatc
actttggaggtggctgaggtggggacgccctcaaaggacagtgaaatcgcccatcagatt
gagaaatgtgactgtcctctgggatacgccggtctctcctgtgaggaatgtgcggctggg
ttctacaggctctctgttcacgccggtggagccgcgtccagagcgggctttggcagctgt
gtccggtgccagtgcaatggacacagtgactcgtgtgatcctgaaacagccgtctgccag
aattgtcaacataacacagtcggtgataagtgtgagcgatgtgctgcagggttttatggc
ataatgcgcggctctcctgacgactgcaaacgctgtgcttgtccactcctcaaccaggag
aacaactttagtcccacctgtcaggcggagggttttaatgactaccgctgcaccgcctgt
cctgaaggctacgagggaaaacactgtgaaaggtgcgcccctggtttccacgggaagccg
agcgtgttgggcggccggtgtgaggagtgtaagtgccatccctacagttcgtttcccaca
gcgtgtgacccgcgctccggacagtgccagtgtcgtcctggagccagcggcctgaagtgt
gaccggtgcatggagaggcatgtgtgtggccccgagggcatcgtgtcgtgtgacgacgac
tgcgcgggactcttgattcgtgacatggagcgtctgctgcgtttgattggcagcgtcaat
ctgactctgcccctgcccctgccgtacagagtgctgtatcgatacgagaacatgacggag
gagctgaagcacatgctgtcccctcagagagccccggagagactgctgcagctggccgac
agtaacctgggcagtctggtcactgagatggacgagctgctcaacagggcaactaaagtg
tctgctgatggagagcagacggcagcagatgcagagcgcagccgcaaaggagccgaggac
ctggagcgctacgtcaggaacacactgctggctgctgaagctttaagggacaaagcacgc
gagctgaacgcgactctgggctcgagggaaggagcttctgagaagagcgtgaatgagatg
aacgacgaaatccaagccatgctcgcagaactacgaaaacggcagctctctggcaagaaa
aatatcgctgacgaagaattgggtgccgcagacgctcttctggctagagtgaagcgtttg
tttggagatccacaccaggccacggaggacctgaagaaagaggtcagtgataaaatgggc
gattacaggcagaaactggacgatgctcaggatctgctgagggacgcacacaacaaaacc
aaacaggccgaaagactagctgctaacaaccaccagatcctcgagcgtctgcagggaaag
agggatgcggccggtaaacagaaaaaggaaacggaggggattttggcagaaggagagaag
atgctagatgaagctaacgctctctcagacaacatcaaccggggcaaagaggagctggag
gagatggagagagagctgggtccactgcacgtccagctggatattaaggtgggacgcatg
ggtcagggtctggacgactccatccctgaactgctgctgagagccgaggaccacgccggc
cagctcaacgaatctgctgccatactcgacagtattctagctgaggcaaagaacctgtcc
ttcaatgccactgctgctttcaaggcttacaccaacatcaagaactacatcgatgaggct
gataaggaggccaaagaggcaaagaaagccagcattgatgctctgcagctggcttcagga
cccaaaggatctctgaaagaccaggccaagggttcgcttcagaagagccaccgtctgtgg
aacgaggccaaagaactgcagaacgatgtgaaagaaaatggagacaatctgggtgctctt
cagttcagactgaaaggagccaacaaaaagaacaaagacttacagaaaggcctgaacgac
acgatggagaaactcaacgccatcccagatgatctggcagtgaagatccaggccactaaa
ctgaaggcagcggaggccaacgacacggccgtagacgtgctcaaccgcctgaaggacctc
aacctcaacctgatgggcctgaagaggaaccacagcaaactggaggacgacgtcaagacc
gccaacaacctgatcaaagacccggagaaaaacattcacgcggccggagctaaagtcaag
gatctggagaacgaggctgacaggttgctggagaaactgaagcccattcaggagctccag
gataacctgaagaagaacatctcgcagatcaaagagctcatcaaccaggctcgcaaacag
gccaactctattaaggtgtctgtgtcatccggtggaagctgtatccgcacctaccggcca
gagatcaagaaaggccgctataacaccattatcctccatgtgaagacgcttgctgctgat
aacctgctcttctacctcggatcagccaaatacgtggatttcttggcgattgagatgagg
aagggtaaggtgaacttcctgtgggatgtgggatcaggggtcggccgtgtcgaatatcct
gatctcgtcatcaatgatggaaactggcatcggatcgaagcctcacgcatcgggctgaac
ggcagtatcttggtccatgcgctggaggggcccaaaacaggcatcttaccgaccctcaga
agtgccaaatcacctgagagttacaccgtgctggatgtggaccagaatgcttacctgttt
gtcggcggcatgctgggctcagtaaagaaggcagacgctgtaaaaaccaccacgttctca
ggctgtatgggagagacgtctctagatggaaaacccatcggcctctggaactacagacag
agagatggggattgtgctggttgtgtggtcagtcctcagccggctgatactgaaggcacg
gttcagtttgacggagagggttacgccgctgtcagccgtcccacccgatggaaccccaac
gtttccaccgtcatgttcaagttccgcacgttctccacagacgcgctcatgatgtacttc
gccaccaaggacatgaaagacttcatgagtgcagaactgaggaatgggaaggtgaaagtg
agttatgatctgggctccggcaccggctccatcatcagtgacaagcgctataatgatggg
aaatggaagtcgttcaccatgtcccgcatgaagaaagaagcaaccatcgccatagtgaac
attgatgctaatgagcaagagcagctgcgggtggcatctccaggtggagcgacgggtctc
aacctgagggaggatgagaggatgtattttggcggtgtgcccaagactggaaactacagg
tcagaggtggttttgaagaggttctctggctgtatgaaagacattgaagtttcccgaacg
ccgtacaatcttctgagcagcccagactacacaggactgaccaaaggctgctccattgag
aacctgcacactgtgagcttctccaggcctgggtacatggagctgaagcctgtgtcgttt
gacgtaggctcagagatctctctctccttcagcacgaagagtgaaaacggcatcatcctg
ttcggcagaggagcactgacttctacgatgcacctgaggcagggcctgaagcctgtccaa
acccctcgccgctcacgcagacagaccggagagcccttcctatccgtgcagctgaataaa
ggagctctggaggtgctggtgttcacaggcagcaagagtccacacagagcttccagaaaa
gcaaataagggaatactgcatgatgggagagagcactcactgcgcatccagagactctcg
ggagcattattcactgtgcaggtggatgaagagccacttttccagcaacaattacccaac
gatcatcctctgagcatccagcggctcttcatcggaggcatcccagcggatatagaaacg
ggtgtacagcggcccaatgtgccgtttgagggctgcatctggaaccttctcatcaacact
gtgcccgtggatttctctcagcccgtggcctttgagaacgcagagattgggcagtgtcct
gacctagccccgcctccaccgccgcccgagacccccgaggaggaggaagaggaagagact
acagccaaaccagagctcatccctacagaagcagctcgtcctccaccagcggcctccact
gccacgcccctcccacaggccacgcccatcacagacacgcccaccagagtcaacggagct
gcggtgtcgtgcgcagcagaggcggagcctgtcgtgctggaactggccaaacagttcggt
ctgtccagaaacagtcacatggcctttgagtttgacgacagaacggtgaagaacaggctg
atcatggagttcgagatccgcacagaagcatcctctgggctggtgttctacatggccagg
atcaaccacgctgacttcgccaccatccagctgaaggagggaatggctcacctgagctac
gacctgggcagcgggaacacctcggtcagcgtgcctcgcatcatcaacgacggacagtgg
cacaagatccgtgtgacgagagagaagcagagaggaatcctggtgattgacggccgttac
tccaaacacaccaccagcccaaagaaagctgatattctggatgtggtggggatgctgtat
gtgggaggtttaccgctcaactacagcaccaagcgcatcggaccggtgctgtacagtatc
gacgcctgcattaggaacttcaagatgatgactctgccgctggacatggagaaacccaca
tccagctaccgcgtgggctcctgcttcgccaacccagaaaaaggaacttattttgatggc
acaggttatgctaaagctgtggacacgtatcgagtgggtaatgatgtgtccgtggatctg
gagttcaggacgtctcagagcagcggtgttctgttaggcgtcagcagccagaagatggac
ggactgggaatcgaacttgtcaatggaaagcttttattccatgctgataatggagtggga
cgcatcacagccgtctatgagccggatcgggaggcggggctttgtgatgggcagtggcac
actgtctccgcccacaagctgaagcaccgcctggagctcactgtggatggcaagaagtcc
gaggcagcgagtccagatgtccgctccgcctccgccgacaccaatgaccccgtgtatgtg
ggcggataccctgagggtctgaagcagttcggactcactataaacacaccgtttaaaggc
tgcatgagaaatgtgaagatcactaaagctgggaagactctggaggtgcagatgaacaaa
gtcctggagctcagaggagttcaacctctcacctgtcctgctagataa
DBGET
integrated database retrieval system
