Carassius gibelio (silver crucian carp): 127938224
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Entry
127938224 CDS
T08819
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127938224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127938224
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127938224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
127938224
NCBI-ProteinID:
XP_052390646
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All DBs
Position
A20:complement(14615223..14641519)
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AA seq
473 aa
AA seq
DB search
MSTREVTEKTADESADDETDWLYGDDNFEEEETTEKEVFSALIGDVDGVSGLNYQPFCFS
LTKESESDSDDDVCVTIGDIKTGGSQGSSFGSSSVSLNIKTSVSGSKSRGLDLDAEGNVL
KVDVESFEEKPWRKPGAELSDYFNYGFNEDTWKAYCDKQRRLRMSLEILSLGSLSKIMVH
RSSSNDLSEHSTRKSSGGISVIGGQAGTISRVEGRRRHSADENNVQVVSEQSSDTELSSP
KLLPFFPPNIPPPPFPPPSISTTLPLIPPPGFPLPPGAPPPMIPPLDSSGRLGGYDRRSA
TPYPFPAGVYTPAVGVASWSGVIDSSKAWENYTRHNKERVREKARERGHTKDQEQERERY
RETDREHSPSSQEHRSEEERVSRHRDHRHYGSERYRESSGREGVRDRHRERRHRDRNEQH
RSSRSGSSRRRHDSDDADSHRRHRQKRSRHSRGSLEPSEECNVDQENQSEATE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaagagaggtgacagagaaaacagctgatgagagcgctgatgacgagacagac
tggctctatggagatgacaattttgaagaagaagagacaacagaaaaggaagttttcagt
gctctgattggtgatgttgatggagtgagtggactcaattaccagccattttgtttttcc
ctcacaaaggagagtgaatcagacagtgatgatgatgtctgtgtgaccatcggtgacatt
aaaacaggcggatctcagggctcgtcatttggttctagttctgttagtctgaacataaag
acctctgtatcaggctccaagtccagagggctggatctggatgctgaaggcaatgtcctg
aaggtggatgtggagtcctttgaggagaagccatggaggaagccaggtgcagagctgtct
gactactttaactatggttttaatgaggacacctggaaggcttactgtgacaaacagaga
cgactacgcatgagcctagagatcctgagcctggggtcattaagcaaaataatggttcat
cggagttctagtaatgatctgtcagaacactcaaccaggaagtcaagtggtgggatcagt
gttatcggagggcaagcagggaccataagtcgcgtggaaggaagaagacgtcacagtgct
gatgaaaataacgtccaggttgtgtcagagcaatcctcggacacagagctatcttcccca
aagctgctgcccttctttcctcccaatatcccacctccacctttccctcctccctccatc
agcaccacacttcccctcataccaccacctggtttcccattacctcccggggcccctcca
cctatgataccaccattagatagcagtggacgtttgggaggctatgatcgacgctctgct
acaccttaccccttccctgcaggtgtgtatacacctgcagtgggcgtggcttcatggtca
ggtgtgatagacagcagcaaggcatgggaaaactacacccgtcataacaaggaaagggtt
agagagaaagccagagaaagaggacacacaaaagaccaagagcaggagagagagcggtat
agagaaactgatcgagaacacagcccctcctcccaagagcacagaagtgaggaggagcgt
gtgtctcgacacagggatcaccgtcattacggaagcgagaggtaccgagaaagctcggga
agagaaggagtgagagacagacatcgagaaagaagacacagagacaggaatgaacaacat
agatcctcacgcagtggaagcagcaggaggcgtcatgatagtgatgacgcagatagccac
aggagacacaggcagaaacgctctagacacagccgaggaagtcttgagcccagcgaggag
tgcaatgtggaccaggagaaccagtcagaggccacagaataa
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