Carassius gibelio (silver crucian carp): 127938270
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Entry
127938270 CDS
T08819
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127938270
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127938270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
ig
Ig_2
fn3
LRR_9
V-set
DHU1_N
Sp38
Motif
Other DBs
NCBI-GeneID:
127938270
NCBI-ProteinID:
XP_052390704
LinkDB
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Position
A20:28386424..28395433
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AA seq
753 aa
AA seq
DB search
METLLVYLMVVVMALKAQKIQVCPKRCICQVLSPNLATLCDKKGLLFVPPNIDRRTVELR
LGDNFITSIKRKDFGNMTKLVDLTLSRNTIGSVTPHAFNDLENLRALHLDSNRLTHITND
TFSGMSKLHHLILNNNQLTHIHIGAFNDLLALEELDLSYNNLESVPWIAIQLMSNLHTLN
LDHNMINYIPEGTFSGLQKLKRLDVTSNKLHKLPPDPVFQRAGVLATSGVLGPTSFALSF
GGNPLHCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQETH
ALEGQQVSLRCKARGDPDPVMHWIAPDGKLVFNSSRTVLHSDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVDLLITKLPHFTNDTSMVQEPDPGSSDIATSAKTGGDGGSSLGNKGGA
EKRVLISEITASTALVKFNFQRNIPGIRMFQVQYNGTYDDSLVYRMIPPTSKSITVNNLA
AGTMYDLCVLAIYDDAMTALTATRVVGCVHFSTEPQYLSCHFMQSQFLGGTIVVIIGGVI
VASVLAFIIFLIVRYRVCQQEGVEKGVELGDVRSPSEHQVCGIIKSMSKQVLGPDACRKK
SPQSDSVPSRQSKPALPDCTVSTSSAIHSWHPASPSPVRPARTDTQVNIELDNTNRNNSA
KLRPTVRSYSTLVTPGSRRAQLQSLHNYQTVPVSCVRVSRRHSLNVDSCKPPAYVTRPQP
LRSKRSLSMSGGDIPQMETSSPSQAPCALESTL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctactggtttatttgatggttgttgtaatggcgttaaaggcccagaagatc
caagtgtgtcccaagcgctgcatctgccaggttttgtcccccaatctggcaaccttgtgt
gataaaaagggtctgctgttcgtccctccaaacatcgacagacgcaccgtcgagctccga
ctcggggacaacttcatcacgagcatcaagcggaaggatttcgggaacatgaccaaactg
gtggacctgacgctctctaggaacacgataggatcggtcacgccgcacgcgttcaacgat
ctggagaacctccgcgcccttcatctggacagcaaccgcttgacccacataaccaacgat
acgtttagcggcatgtccaagctgcaccatctcattctgaacaacaaccagctcacgcac
atccacataggagcgttcaacgaccttctggcgctggaagagctggatctatcctacaac
aacctggagagcgtgccgtggatcgccatccagctcatgagcaacctgcacaccttaaac
ctggaccacaacatgatcaactacatccccgaaggaaccttctccgggcttcagaagctc
aagcgtctggatgtgacgtctaataagctccacaagctcccgccggatccggttttccag
cgcgccggagttttagccacgtctggtgtcttgggtccgacgtcgttcgcgttgagtttc
ggaggaaacccgctgcactgtaactgtgagctgctgtggcttcgacgtctgcggcgcgag
gatgatctggagacctgtgcggctccgcagcatctcgccggacgctatttctggaccgta
tccgaggaggagttcctgtgcgagccgccgctcatcactagacactcgcaggagacgcac
gctctcgagggccagcaggtgtccctgcgctgtaaagcccgaggagacccggatcccgtc
atgcactggatcgctccggacgggaagctggtgttcaactccagtcgcaccgtcctccat
tcggacgggaccctggacatcctgatcagcacggtcaaggactccggatctttcacctgc
gtcgcgtccaacccgtccggagaggcgcagcagacggtggatctgctcatcaccaaactt
ccacatttcaccaacgacaccagtatggtccaggagccggatccggggtcatctgacatc
gccacttctgccaagacgggtggagacggaggctcctcgttgggcaacaagggtggagcg
gagaagagggtcctgatctcggagatcactgcatccacggctctggtgaagttcaacttt
cagaggaatattccagggatccggatgttccaggtgcaatacaacggcacgtacgacgac
tcgttagtgtacagaatgattcctccgaccagtaaaagcatcacggtcaacaacctggca
gcaggaaccatgtacgatctttgcgttctggccatttacgacgacgctatgacggcgctg
acggctactcgtgtggtgggctgcgttcacttctccaccgagccgcagtatctgagctgt
cacttcatgcagtcacagttcctgggcggcaccatcgtggtcatcatcggcggcgtgatc
gtggcgtccgtcctggccttcatcatcttcctcatcgtgcgataccgggtgtgccagcag
gagggcgtggagaagggtgtagagctgggcgacgtgcgctcgccgtccgagcatcaggtg
tgtggcatcatcaagtccatgtccaagcaggttctgggtccagacgcgtgtcggaagaaa
tcaccgcagagcgactccgtcccgtcccgacagtccaagccagctcttccggactgcacc
gtctccacgtcctccgccatccacagctggcaccctgcgtccccgagtccggtccgcccg
gcgcgcacggacacacaagtcaacatagagctggacaacaccaacaggaacaactcggcc
aagctgcgtcccaccgtgcgctcctattccaccctggtgaccccggggtcacgcagagcc
cagctccagagcctccacaactaccagacggttccggtgagctgtgtgcgcgtcagccgc
cgtcactcgctgaacgtagactcgtgcaaacctccggcgtacgtcacccgcccgcagccg
ctgcgctccaagcgtagtttatccatgagcggcggagacattccccagatggagacatcc
tcaccgtcccaggccccgtgcgctctggaaagcacattataa
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