Carassius gibelio (silver crucian carp): 127938358
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Entry
127938358 CDS
T08819
Name
(RefSeq) protein strawberry notch homolog 2-like
KO
K26273
protein strawberry notch
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
127938358
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127938358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127938358
NCBI-ProteinID:
XP_052390897
LinkDB
All DBs
Position
A2:complement(29973298..30003573)
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AA seq
1560 aa
AA seq
DB search
MPTPAASVVMETEDLVPPEGPQLGSLEFSAPSPPLTSSMESQLCPSNSWMYPQQIQYNQH
YPMQSGRQLQLNPSSGLDLSDIDFHDLVQNGDFSQDLCIDELSNTSLFSSASDSLSEYPV
PSGFGSDILSQRPAEGPVPQMYWEIPGHSQRQQNLSAFNGRFDDFSAILPASVTGFKPAA
PPPPPEEEEEADDEETEDLGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPPPDITYT
LSIPDSTISSGRLSALQLEAIIYACQQHEVILRNGQRAGFLIGDGAGVGKGRTVAGIILE
SFLKGRKRALWFSVSNDLKYDAERDLRDIDAPNIPVFALNKIKYGDMATSEGILFATYSA
LIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQTKLPRA
RVVYASATGASEPKNMIYMSRLGIWGQGTPFRTFEDFLHAIEKRGVGAMEIVAMDMKVSG
MYIARQLSFSGVSFRIEEITLDQEFKLVYNKAARLWAEALVLFTAAAETLGLVSRKSLWG
QFWASHQRFFKYLCIAAKVRRLVEIAHTEMQHGKCIVIGLQSTGEARTREVLDENDGHLD
RFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPRSRPLKFPKHCVEVGGVIKISDD
SDSDSEEIDSYSNSSPESLQDNDDVIFLNHINGPTAKLEELKQRMLGKIAELGKELPLNT
LDELIDRFGGPEKVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNIREKERFMTGEK
LIAIISEAASSGISLQADRRVPNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYI
FLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKAI
LRQIDNKVPPPKGYPGGDIMFFRDMKQGMIDVGIFCKEPRLSQNTERDCSITKFLNRILG
LEVHQQNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQE
GQVILYKISVDRGMPWEEACSKAEKLTGEYDGFYLSNRLRGSQPCVLLAEQGRGRNLILY
KPNIGKQINPENQDNLLLRYYKVTPDEAKDFWKSQFVFSFTNCMHANWKGKCKLIDEGQE
CFQGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPENCV
LRVREELSQMDEKAKKERREREKRIRQEMLTKMIIANPPPSLHYPQSLLPPKSEAVSEVL
DLTISPCPSPDTKTHVPDLNGVSLRGRMLDVRARPGAVVPETYNLEDLISRERQRHRQVA
LHPNMRLSSPSQAPQQHIHTLKQNHSSFGMLTQQQQQQSGSRTHSSEQYKALLSQLERGQ
DTSLVLRLLTQMQSPQSSHAMLHQNTQRVMHTSNAHLLGMHLKQHPGEHAQSQSLPSQPQ
TMQSHATQPATETTNREFDFDDLEYGYPSPDSQHQYPFTSQALTPPPPAYSSLLASAPTN
SSSLSDSSSSSSHFTPSSSSSEQTHPLPNGHSSMDAPPETLIHGPPSDHRQSVIQFKTTD
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcctgccgcgtctgttgtgatggaaacggaggacttggtgccccccgagggc
cctcagctggggagcctggagttcagcgctcccagtcctcctctcacaagttccatggag
agtcagctgtgtccgtcgaactcatggatgtacccacagcaaattcagtacaaccagcac
tatcctatgcaatctggcaggcagctccagctgaacccgtcctcgggtctggacctgtct
gacatcgactttcacgaccttgtccagaacggagacttctcccaggatctgtgcatagac
gagctgtccaacacatcgctgttctcctcggcatctgattctctgtcggagtatccagtc
ccttcagggtttggcagtgatatcctgtcacagagacccgccgagggccctgtgccacag
atgtactgggaaatacctggacacagtcagagacagcagaacctgagcgcgtttaatggg
aggtttgatgacttcagtgctatcctgcctgcgtcagtcacaggatttaagcctgctgct
cctccgccgcctccggaggaagaggaggaggcagatgatgaagagacggaggatttgggg
catgcggacacatacgcagagtacaagccatccaaatctactataggaatctctcaccct
gacatcgtggtggagaccaacacactgtccagcgttcctcctcctgacatcacctacaca
ctgtccattcccgacagcaccatcagctccggccggctgtccgctctgcagctggaggcc
atcatctacgcctgccagcaacacgaggtgattcttcgtaacggtcagcgggcagggttt
ctgatcggagacggagctggcgtcggaaagggccgcactgtggccggaatcatactagag
agctttttaaagggacggaagagagcactatggttcagtgtgtcaaatgacctgaagtac
gatgctgagagagatctccgagacatagacgctcccaacatccctgtgtttgctttaaat
aagattaaatacggagatatggctacctcggagggcattttattcgccacatactcggct
ctgattggagagagccaggccggaggtcagcaccgcaccagactcaaacagatcctggac
tggtgcaaaccaaactttgatggggtcattgtgtttgacgagtgtcataaggctaaaaat
gcgacctctaccaagatgggtaaagctgtgctggacttgcagactaaactgccccgagcg
agagtggtgtacgctagtgccacaggtgcttctgagccaaagaatatgatctacatgagc
cgactggggatctgggggcaaggaacgccgttcaggacctttgaagacttcctgcatgct
attgagaagaggggggtcggcgcgatggagattgtggccatggatatgaaagtgagtggc
atgtacatcgcacgccagctgagcttttccggcgtgtcgttccgtatagaagagatcacg
ctggaccaagagttcaaactggtctacaataaagctgctagactgtgggccgaggctctc
gtgctgttcactgcagctgcggagacgttgggtctggtgtcccgtaagtctctgtggggt
cagttctgggcgtcacaccagaggttttttaagtatctgtgcatcgccgctaaagtccgt
cgtctggttgaaatcgctcatactgagatgcagcacggcaagtgcatcgtgattggcctg
cagtccacaggagaggctcgtactcgagaggtgctggacgagaacgacggacacctggac
cgattcgtctccgctgctgagggtgttttccagtcattagttcagaaacacttcccaaca
cagaaacctaaaagagagaaaagcgccgcaagcaagaggaaacgaaaacccagaagccgg
cctttaaaatttccaaagcactgtgtggaagtgggcggggttattaaaatcagcgacgac
tcagactccgactcggaggagattgacagctactcaaactcctcccctgaatcgctgcag
gacaatgacgatgtgattttcttgaaccacatcaacgggccgaccgctaaactagaagaa
ctcaagcagaggatgctgggaaagatagcagagctggggaaagagctgccgcttaacact
cttgatgagctgatcgacaggttcggaggaccagagaaggtttctgagatgacgggtcgt
aaggggcgtgtggtgcggcgtcctgatggcagcgttcggtatgagaccagagcggagcag
ggcctgaccatcgaccacgtcaacatcagagagaaagagcgcttcatgaccggagagaag
ctgatagccatcatctctgaagcagctagctcaggcatctctctacaggcggatagacgt
gtgccgaaccaaaagagacgagttcacatgaccctagagctgccgtggagcgcagaccga
gccatccagcagttcggtcgaacgcatcgctctaatcaggttacagctccagagtacatc
ttcctcatctctgaacttgctggagagagacgcttcgcctccatcgttgccaagagattg
gagagcctgggggctctgacacacggcgaccgacgagccactgaatccagagacctgagc
cagtacaactttgagaacaaatatggcaccaaagcgttggataagatcactaaagccatc
ctcaggcaaatcgacaacaaggtccctccaccgaagggctacccaggaggagacatcatg
ttcttcagagatatgaagcaaggcatgatcgatgtgggaatcttctgtaaggagccgcgt
ctaagtcagaatacagagagagattgctccatcactaagtttctgaaccgtattttgggt
ttggaggtccatcagcagaactctctgttccagtacttcaccgataacttcgactacctg
atcaacaaggataaaaaagagggaaaatatgacatgggaatattagatctcgctcctggt
aatgatgagattcacgaggaaacacaggagaagtttctaactccaggaaaccctcaggaa
ggccaagtcatcctctataagatcagtgttgatcgtgggatgccctgggaagaggcctgc
agtaaagcagagaagctcactggagaatatgatggtttttacctctcaaacaggctgcgt
gggagtcagccgtgtgtcctgctcgccgaacagggtcgaggtcggaatctcatcctttat
aagcccaacatcggcaaacagataaatccggagaaccaggacaacctgctcctgagatac
tacaaggtgactcctgatgaagcaaaggatttctggaagagtcagtttgtcttttctttc
accaactgcatgcatgccaactggaagggtaagtgtaagctgatcgacgagggccaggag
tgttttcaggggatgcgtctcaggcagtatcacatgctgtgtggagcgctgctgagggtc
tggaaacgagtgtctgacatcgtctcagacatcaccaactccagcatcctgcagatcgta
cggctcaaaaccaaacagaacagcaagcaagtcggtatcaaaatcccagagaactgcgtc
ctccgcgtgcgcgaggagttatctcagatggacgagaaggcgaagaaagagcggcgggag
agagagaagcgtatacgccaagagatgctgaccaagatgatcatcgcaaaccctcctccc
tcccttcactacccacaatcccttctgccgccaaagagcgaagccgtcagcgaggtcttg
gatctgaccatcagcccctgcccatcgccggacaccaagacgcatgtgccagacctaaac
ggcgtgtccctccgtggacgcatgctagacgtgagagcacgcccgggcgcggttgttccc
gagacgtacaacctggaagatttgatctcccgggagcggcagagacacagacaggtggcg
ctgcacccgaacatgcgcctgtcgtcgccgtcgcaagcccctcagcagcacattcacaca
ctaaagcagaatcattcgtcgtttgggatgctaacacagcagcaacagcaacagagcggt
tcacgcacacattcgtccgagcagtacaaagcgcttctatcgcagctggagcgagggcaa
gacacgtcgctcgtgctgcggcttctcacacaaatgcaatcgccgcaatcctcgcacgca
atgctacaccagaacactcaacgcgtgatgcacacctcaaacgcacacttgctcggcatg
cacctgaaacaacatcccggcgaacatgcgcagtcgcaatcccttccgtcgcaaccccaa
accatgcaatcacatgccactcagccagctacagaaacaacgaaccgcgagtttgatttc
gacgacttggaatacggttacccttcgccagattcgcaacatcaatacccgttcacctct
caagcgttgactccgcctcctcctgcttactcctccctcttggcgtcagcgccgacaaac
tcctcctccctctcggactctagctcctcctcctcgcacttcaccccatcgtcctcttcc
tctgaacagacgcatccgttaccaaacggccacagcagtatggacgcccccccggagacc
ctgatccacggaccgccctccgatcaccgccagtccgtcatccagttcaaaacaacagac
tag
DBGET
integrated database retrieval system
