Carassius gibelio (silver crucian carp): 127938416
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Entry
127938416 CDS
T08819
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127938416
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127938416
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
PEP5_VPS11_N
MIOS_WD40
TAF1C_beta-prop
VPS11_N
DUF2844
Motif
Other DBs
NCBI-GeneID:
127938416
NCBI-ProteinID:
XP_052390971
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All DBs
Position
A20:7905774..7911251
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AA seq
654 aa
AA seq
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MTLFHHVVDRGDVKRRRNGQRRHYPLSSLLDGYQCARHDEHISYGASAAAVPPFGCTFSS
APGQQNSLAVANEEGFVTIFNTGEKQSSVLKEWQAHDNAVFDIAWVPGANSLVTASGDQT
ARLWDVVTGDLLGTFKGHQCSLKSVAFSKQEKAVFSTGGRDGNIMIWDSRCSKKDGFYRQ
VKQITGAHMKLEKYTPQIKKRRGMAPPVDSQQGVTVVLFCDESKLVSSGAVDGIIKMWDL
RKNYTAHQPSPLPLQAYPYPGSCTRRLGYSGLSLDSTGSRLFSNCTDDNIYMFNISSLKT
TPVAVFSGHSNSSFYVKSSVSPDDQFLASGSSDHHAYIWKITEPKQAPMMLQGHSQEVTS
VAWCPTDFTKIASCSDDNTVRIWRLNRRPDGEDSLNRDLNVVGWTLRKIQSPTRTPDPYS
PVEVTPAKSPGSERAVSLASPQPAACAPMGADLPLPSNTSAPSAEVSSLKRPSSIQQWIS
RSSSPTRRGTPPLCKVLTPVLQSPSSERRAKRRLETGERSGLGEESDGVSELYPNVKRSR
SSGSTRKCPEEKAEPFCLQTETRLSSDCQAGTGKENRSPRNSDWLSVISQRFKGSAQPRS
PNGCSKRHDARTHSSSAAVSPCPMRVVSPPPTKKASPSRHMKKISSYFVKRPQD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtttcaccatgttgttgatcggggagatgtaaaaagaagacgcaatggtcag
cgtcgccactatccgctgtcctctctgctggacgggtaccagtgcgcacgacacgatgaa
cacatctcatacggagcctcagctgctgctgtgccgccctttggatgcacattttcctcc
gctcctggccaacagaacagccttgctgttgcaaatgaagaagggtttgtgaccatcttc
aatactggagaaaagcagagttctgtcctgaaagagtggcaggcgcacgataatgcagtt
tttgatattgcctgggttcctggtgcaaacagcttggtgacagcgtccggtgaccaaacg
gcccgtctgtgggatgttgttactggtgacctgctgggaacatttaaaggacatcagtgc
agtcttaaatctgtggctttttccaagcaagaaaaagctgtttttagcactggaggcaga
gatgggaacataatgatttgggattcaagatgcagtaaaaaagatggtttctacaggcaa
gtcaaacagatcacgggtgcccatatgaaacttgaaaaatacactcctcaaataaagaag
aggcgtgggatggcgccccctgtggactcgcagcagggtgtgacggtggttttgttctgc
gacgagagcaaactcgtctcttcaggagcagtcgatgggatcattaaaatgtgggatttg
cggaagaactacactgcacaccagcccagccccctccctctgcaggcctatccttaccca
ggctcctgcacacgcagactaggttattctggtctgtcactggactccactggctccaga
ctgttctccaactgcactgatgacaatatctacatgttcaacatcagcagtttgaaaaca
actccagttgctgttttcagcggtcacagtaactcctcgttttatgtgaagtccagtgtc
agcccggatgaccagttcctggccagtggttcgagtgatcatcatgcttacatatggaag
attaccgagccaaaacaagctcccatgatgcttcaaggccatagtcaggaagtcacatca
gtggcctggtgccccacagatttcactaagatcgcttcctgctctgatgacaacactgtc
aggatctggcgactgaaccgcagaccagatggagaagattcattgaaccgagatctgaac
gtggtcggctggacacttcggaaaatccagtcaccgactaggacacctgacccttacagc
cctgttgaagtcactccagccaaaagtcctggctccgagagggccgtctctctggcttcg
ccccagcctgctgcttgcgcccctatgggtgctgatttacccctgccatcaaacacatct
gcaccttcggccgaagtcagcagcctcaaacgtccctcgtccatccagcagtggatcagc
cgcagtagttcccccactcgccgcggtacacctcctctgtgtaaggtgctcacacccgtc
ctccagagcccctcctctgaacgtcgagcgaagcgacgactggaaacgggtgagagatct
ggtttgggagaggagagtgacggggtgtctgaactttatcccaatgtaaagagaagcagg
agttcggggagcacacggaaatgtccagaggagaaagcggagccattctgtttgcaaaca
gagactcggctcagctcagattgtcaagctggcacgggcaaagagaaccgctctccgagg
aactctgattggctttctgtgatcagccagaggtttaaaggatcagctcagccaagaagc
cccaacggctgcagcaaacggcacgacgcaagaacacacagctcttcagcagcagtctca
ccgtgtcccatgagagttgtctctccaccgccaaccaagaaagcatcaccctccagacac
atgaagaaaatctccagctactttgtgaaaagaccccaagactga
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