Carassius gibelio (silver crucian carp): 127938526
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Entry
127938526 CDS
T08819
Name
(RefSeq) syntaxin-7-like isoform X1
KO
K08488
syntaxin 7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04130
SNARE interactions in vesicular transport
cgib04140
Autophagy - animal
cgib04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127938526
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127938526
04140 Autophagy - animal
127938526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127938526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127938526
Membrane trafficking [BR:
cgib04131
]
SNARE
Syntaxin (Qa)
Stx-Endo
127938526
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127938526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin_2
SNARE
TPR_MLP1_2
Baculo_11_kDa
DUF3394
TMCO5
ANIS5_cation-bd
Prominin
TOP_N
Enkurin
E1-E2_ATPase
Motif
Other DBs
NCBI-GeneID:
127938526
NCBI-ProteinID:
XP_052391149
LinkDB
All DBs
Position
A20:25196634..25210091
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AA seq
258 aa
AA seq
DB search
MSRFSGVDANVLAQTISSNIQRITSLTNEIQQMMRHFGTAQDTTDLRQTLQEKQQKVNQL
AKVTDKCMKVYSALPVSTEQRQRKIQRERLITEFSNALALFQKTQREVAKKEKEFVARVR
ASSRISGGDIDDGFGGFPSPFQSEIHAQDQRYEETITEEDLQLIQERESVIRQLESDITD
INEIFRDLGMMVHEQGDMIDSIEANVSNAEMNVQTATQQLGRAASHQTSFRKKIFILIAV
LIVFAVIIGLIIWASVKN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatttagcggagtggatgcaaatgtgctggcacagactataagttcaaatatc
caaagaataacatcgctaactaatgaaatccagcagatgatgagacattttggaacagca
caagacacaactgacctgcgacagacattacaggagaaacaacagaaagtcaatcagctt
gctaaagtgacagacaaatgcatgaaagtatacagtgctttacctgtgtcaacagaacag
cggcaaagaaaaatccagcgagaacgtctaatcactgaattctccaatgcactggccctt
ttccagaaaactcagcgagaggtagcaaagaaagagaaggagtttgtggcgcgtgtccga
gcgagctcaagaatttcgggtggtgatatagatgatggttttggaggatttccatccccc
tttcaaagtgagattcatgctcaagatcagagatatgaggagaccatcacagaagaagat
ctgcagctcattcaggagagagaatcagtgatcagacagctggagtcggacatcacagac
attaatgaaatcttcagagatctgggcatgatggtgcatgaacagggagacatgattgac
agtatagaggccaatgtatcaaacgcagagatgaatgtgcagacggccacacaacagctg
ggtagagcagcaagtcaccagacgtcattccgcaagaagattttcatcctgatcgctgtt
ctgattgtgtttgctgtcattattggtttgattatctgggcttctgtcaaaaactaa
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