KEGG   Carassius gibelio (silver crucian carp): 127938848
Entry
127938848         CDS       T08819                                 
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127938848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127938848
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127938848
 Complex B
    127938848
 Complex C
   U2 SnRNP specific factors
    127938848
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 127938848
NCBI-ProteinID: XP_052391700
LinkDB
Position
A20:20873309..20874934
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKILKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcagctaaacgagcgaatattcgtttacctcctgaggtgaacaggata
ttgtatattcgtaaccttccatacaaaatcactgcagaggagatgtatgacatatttgga
aagtatgggccaattcgtcagatcagagttgggaacacaccagagacgagaggaacagcc
tatgtcgtttacgaagacatctttgatgccaaaaatgcctgtgatcatctttctggattc
aatgtctgcaacagatacttagtagtattgtactataatgcaaacagggctttccaaaaa
atggacacaaagaaaaaggaggagcagctgaaaattctcaaagagaagtacgggataaac
acagacccaccaaaatag

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