Carassius gibelio (silver crucian carp): 127938879
Help
Entry
127938879 CDS
T08819
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127938879
03320 PPAR signaling pathway
127938879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127938879
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
127938879
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127938879
Nuclear receptors [BR:
cgib03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127938879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
127938879
NCBI-ProteinID:
XP_052391738
LinkDB
All DBs
Position
A20:20040997..20068922
Genome browser
AA seq
470 aa
AA seq
DB search
MWHPAALPLQGQSHSREGDHYNNHTSVLNSPPSQPPPLSSMVGHPSVISSSRPLQSPMST
LGSSMNGLASPYSVIAPSLGSPSMSLPSTPSMGFNNLSSPQMNSLNVNNSEDIKPPPGLA
PLSNMSSYQCTSPGSLSKHLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDC
KECLIDKRQRNRCQYCRYQKCLAMGMKREGLYLHAVQEERQRGREKGDNDVESTGGFNED
MPVDKILDAELAVEPKTETYTENNPGNSTNDPVTNICHAADKQLFTLVEWAKRIPNFSDL
PLDDQVILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRSSAHSAGVGSIFNRVLTE
LVSKMKDMQMDKTELGCLRAIVLFNPDSKGLSNPADVEALREKVYASLETYTKHKYPDQP
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatccggcagcgttgcctcttcaaggccagagtcacagcagagagggcgatcac
tacaacaatcacactagtgttcttaattcgcctccctctcagccaccacccctaagctcc
atggtgggtcatccgtccgtcatcagttcgtcccgcccactgcagtctcccatgagcacc
ctgggctcatcaatgaatggcctggcctcaccctactcagtcatcgccccgtctctgggc
tcaccatccatgtccttgccctctacacccagtatgggatttaacaatctcagtagccca
cagatgaactctttaaatgtgaataactcagaagacatcaagcctccaccaggattggct
ccgctgagcaacatgagcagctatcagtgcaccagccctggatccctctccaaacacctc
tgtgccatctgtggcgaccgatcttcagggaagcactatggtgtttacagttgtgaaggt
tgcaaaggcttctttaagaggaccatccgaaaagacttgacctacacgtgtcgagactgt
aaagagtgtttgatcgacaaacgccagcgcaaccgttgccagtattgtcgctaccagaag
tgcctagcaatgggcatgaaacgggaaggtttgtatttgcatgcggtgcaggaagagagg
cagcgtgggagggaaaaaggtgataatgatgtggaatcgacgggcggttttaatgaagac
atgcctgtggataagattctggatgcagaacttgcagtcgaacctaagactgagacatac
accgagaacaatcctggcaactcaacaaatgacccagtcactaatatctgccacgcagct
gacaagcagctgtttactcttgtggagtgggccaagagaatacctaatttctcagatctg
cctctggatgatcaggtcattttgcttcgagcaggatggaacgagctcctcattgcttcc
ttctctcatcgctcaatcacagttaaagatggcatcttgctgggcacaggcctgcatgtc
cacaggagcagtgctcacagtgcaggtgtgggctccatctttaacagggttttgactgag
ctggtgtctaaaatgaaggacatgcagatggataagaccgaactaggctgccttagagcc
atcgtcctcttcaatcctgattccaaaggcttgtccaacccagcggatgtagaggcactg
agggagaaagtttacgcctcactggagacctatactaaacacaagtaccctgaccagcct
ggcaggtttgctaaacttctgttgcgtcttcctgccctccgatccattggccttaagtgt
ttggagcacctgtttttcttcaagctgattggagacacacccatagacactttcttgatg
gagatgctcgaagcaccccatcagatcacgtga
DBGET
integrated database retrieval system
