Carassius gibelio (silver crucian carp): 127941288
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Entry
127941288 CDS
T08819
Name
(RefSeq) protein transport protein Sec16A-like isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127941288
Membrane trafficking [BR:
cgib04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127941288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
127941288
NCBI-ProteinID:
XP_052392167
LinkDB
All DBs
Position
A21:complement(3598009..3617403)
Genome browser
AA seq
2145 aa
AA seq
DB search
MQPPPRTAPPGASGPPPPSGGPNAFRRTRPHKHGAAAAMTPAAPPTHPVTDPFTFGRQSF
SPMAVGSQVPTTNSNPLPMQGPPLPMFNPTTPAQGPPPGAAQTASPGPPPRIFTPQPVLP
GPAPNFNPPPAEPGYFNSQEPMPYIAQLPNPVSSFSSGSSHPPSTAPTPPVQSQTPFQSQ
PMPPLPSHWVPDHRSRPPSVQNYFQPTSDLPSQPFQAQALPPVSSSHTAPPLAQSQNQGQ
SAQPNVTGPAPTEQLNSYFPSQNYFSQSGGPLEPWFNQNPQDPSQRACPVSYSEVPSDSG
TLSMFFRGNDVENEETLSGEGRVNGIHHPFHSTTEFSGPYLNDTGNIRAGAGPCDSVENQ
ECVPNQEVLPSEPPPSQAFEGGPNLETPETGPHLARSASVSSSYSNVSHSSGHGPQSGTH
IPRRQQGVVGTFIQQESPRPPDHPALPLSTGGYFEQIDSNPAAEASPTFPTPSPPKPVGV
FQASANSSFEPVRSHSVGVRPAEVDRARVVMEKGGSDIQSGNLEQPPDNLETIYLPERRP
SSRAQGARRPIESPATTLWAQNDTASLGANILLAPAAPSLAATFVPAHPSEVIQPPEDGP
LDLHPANPDPQPASENLEIPPDSTSQTSLGYASLLVTSPPVETLNQPVLIAPPSSLVSSQ
ILLQPSNQTSPQETATLVHPHPQSSVANQMPQNSPPTNQPQPLFSQTPINFNTSSTQAKD
VQPSVQAPRPVLSRAPSLRSDSQSLLPSVSQALTFAPATSHSEPSNYELLDFSMHQPQST
NQVMVPAVSQSAHPAGLVNNTPGFYLQVTKDAQQGGQSDSETLPLQQISNTPRPSSNQPD
KDPAHISHPAHPPPAQHQPPPQAPPTQPGVPPGSALPSSYPPQSGNAAPQPLQEPQRPPS
SLSGQSGYGAPPAMPPGPGYAGYYPGPYPEYQNGRLPYPPQYPVDPRSQSYYQDDPYRRG
DPRYGWYDSQNPGYREAERQPERPSSRTSQYSDRPNSRQGYQDDVSRTSRSAYDEYYANY
YKRQNDAYGDRSRWYDPNAAYDPRYRAYYDQVYGWYYGDAYYNQQYQNRGREGYDDQWRY
YPGYDSSFDDDYRRRDPYADDFDRRSVHSEQSAHSVHSSHSQHSGFSSRSQQSQMYRSQP
DLVSAVYDTTGTTLPADYTYSQYPNPSDTTDYSQIPYSTDNTWTAPEQPPPRPLTPEKYS
VPHRCARFGPAGQLILVQPNLPSAGQPTLVEIHSMEMILQDSPEQSEMRSFPGPLVKEET
HKVDVIKFAQNKAQECLRNDDLIDKDSAYLIWEFIVLLCRQNGTVVGTDIADLLLKEHRS
VWLPGKSPNEANLIDFNNEAIEHAEEKEAGPISLLSDTFMGVPENVGKETERFRELLLFG
RKKDALESAMKKGLWGHALLLASKMDNRTHARVMTRFANSLPINDPLQTVYQLMSGRMPA
AATCCGDEKWGDWRPHLAMVLSNLTHTLDLDTRTISTMGDTLASKGLVDAAHFCYLMAQL
GFGVYTKKSTKMVLIGSNHSLPFLKFCSSEAIQRTESYEYAQSLSSQPLSLPNFQVFKFI
YACRLAETGLCAQALHYCEVISRTLLSLPEYFSPVFVSQLIQMSLRLRFFDPQLKERPEQ
ELFIEPDWLLHLRQLDGQIKDGAITLRADHSTPQLYHCSTPSSEDHCSPPDPSTLNPDPH
NPLMTSLMPSAGVQLMPPAPPTILQDGAVPLQQAPPSGESVPFYPVAPGPPQPKFSAPFL
PEMHDQYMLMPPQIPTQIPQQMSPQIPTYSPTERPPQMPPGMPPQMPPPMPRSEHGSVPP
SPQQFPQSSPSFSAPPPQGKDFYDEMARMGPGRRSRTTSQSSVQMGPRSRTTSESSNHSG
RERSSSLANQGSPPPPPIPEAPPQDEPKKTKKDSPQKGASGGWLTWLYPKRKNEAHLPDD
KNKSIVWDEKKQKWVNLDEPEEESKPPPPPPTGFPKAPMGGMRPPGAGGPPGGPPVNMFS
RRAGTKSRYVDVLNPGRGGSKPAAAVPPPADLFAPLAPMAMPANLFTPAAAPAEQQQQQP
MEGSVPEASGENPAQTSATVPQMFNPNALPPGPEGTQSGELSRSSSMSSLSREVSQHLNQ
VPAEPPAQGAPPAGGVTFYNPSQFAQSVPTSRTRPGRLAQRGYKQ
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctcctcggacagcccctcctggagctagtggaccaccgcctccctctggt
ggaccaaatgccttcagaagaaccagacctcacaagcatggggctgcagctgctatgaca
ccggctgccccacccacacatccagtgactgatccttttacctttggaagacaaagtttt
tcacccatggcagtgggcagccaagttccaacaacaaacagcaacccacttcctatgcaa
ggtcctcccctgcccatgtttaacccgacgactccggcacaagggccaccaccaggagca
gcgcagacagcctctcctggcccaccaccaagaatttttacacctcaacctgttctccca
gggcctgcaccaaacttcaatcctccacctgcagagccaggatactttaattcccaagaa
cctatgccctatatagcacaattgcctaaccctgtttcttccttcagttctggttcatca
catccaccctccactgccccaacacctccagttcaatcccagactccatttcagtcccag
ccaatgccgcccttaccttctcactgggtgcctgaccacagaagccgcccaccttctgtt
cagaactactttcagccaactagtgatctgccatctcagccttttcaagctcaagccctt
ccccctgtgtcctcttcccacacagccccaccattggctcaatctcagaatcaaggtcag
tcagctcaaccaaatgttactggtcctgctccgactgagcaactgaactcctacttcccg
tctcaaaattacttcagtcagtcaggtggacccttagagccatggttcaatcaaaaccca
caggatccgtctcagcgtgcctgccctgtctcctactctgaagttcccagtgattccgga
actctttcaatgttctttcggggcaatgatgttgaaaatgaagaaacactgtcaggggag
ggacgtgtaaatgggattcatcaccctttccattcgacgactgagttctctggtccatat
ctgaatgacactggtaacattcgagccggggcagggccatgtgattctgtggagaatcag
gaatgcgttccaaaccaggaagtgctgcctagtgagcctcctccaagccaagcctttgag
ggggggcctaatttggagacacctgaaactggacctcatctggcccgctctgcaagtgtt
tcatccagctacagtaatgtcagtcacagcagtgggcatggtcctcagagtggcacccac
atccctcggcgacagcaaggtgtagtgggaacatttatccaacaggaaagtccccgccca
ccagatcaccctgctttgcctctctccactggtggatactttgaacagatagactccaac
ccagctgcagaggcaagtccaactttcccaactcctagcccacctaaaccagttggtgtg
ttccaagcgagtgcaaattcttcctttgagcctgtccgctcacacagtgtaggagttcga
cctgctgaggttgatcgtgcacgtgtggtcatggaaaagggtggaagtgacatacagtct
ggcaacctagaacaacccccagataacttggagaccatttacttaccggaacgccgacct
tcatctcgagctcagggagcacgacgccccattgagagtcccgctactacactctgggct
caaaatgacactgccagtcttggtgctaacatactgttagcccctgcagcaccctcgctg
gctgcaacatttgttccagcacatccatccgaagtcatccagccaccagaggatggccct
cttgatttgcatccagcgaacccagatccacaaccagcctctgaaaacctggaaattccc
ccagattccacatctcagacaagtttggggtatgcctccttgctggtgacctcacctcca
gtagagaccctgaaccagcctgttttgattgcgccaccttccagtttggtttcctctcaa
atcctcttacaaccctccaatcagacaagtcctcaagagacagcaacacttgtgcaccca
caccctcagtcttctgtggccaatcaaatgcctcagaattctcctccaacaaatcagcca
cagcctcttttctctcaaacaccaataaactttaacacttcttccactcaggcaaaagat
gttcagccctctgttcaagcaccccgacccgttctttcaagggctccgtctcttagaagt
gatagccagtctcttctgccttctgtttctcaagctctgacttttgcccctgccacaagt
cacagtgaaccttcaaattatgagctgcttgatttttccatgcatcaaccacagtccacg
aatcaggtgatggtcccagctgtctctcagtctgcccatcctgcgggcttggtgaataac
acacctggcttttacctgcaggtcaccaaagatgcacagcagggtgggcagtctgacagt
gagactctgccccttcagcagatctccaacaccccacgaccctccagcaaccaacctgac
aaagatccagctcacatctcccaccctgcccatccacctccagctcaacaccagcctcct
ccacaggcccctccaacacaacctggtgttcctcccggatctgccctaccttcctcttac
ccaccccagtctgggaacgctgccccccagccacttcaagaaccccaaagacctccttca
tctctaagtggtcagtcaggttatggtgctcctcctgcaatgccacctggtccgggttac
gcagggtactacccgggaccctaccctgagtaccagaatggaagactgccgtatccaccc
cagtaccctgtggatcccaggtctcaaagctactatcaggacgatccctaccgtagagga
gatcctcgatacggctggtatgatagtcaaaatcctggctaccgggaggctgaacgtcaa
ccagagaggccgagttctagaaccagccaatactcagacagacccaactccagacagggg
tatcaagacgatgtttctagaaccagccgtagtgcctatgatgaatactatgcaaactac
tataaaagacagaatgatgcctatggagataggagcaggtggtatgatccaaatgctgct
tatgatccacgctacagagcctactatgatcaagtatatggctggtactatggagatgcc
tactacaaccaacaatatcaaaaccggggaagagagggctatgatgatcaatggcgatat
taccctggttatgactcaagctttgatgacgactaccgacgccgcgatccgtacgctgac
gattttgaccgccgttcggttcacagtgaacaatcagcacacagtgtgcattcatcacac
agtcaacacagtggcttcagctcacgatcacaacagagtcaaatgtatagaagtcaacca
gatttggtcagtgcagtctacgataccactgggacaactcttccagcggattacacctac
agccagtatcctaacccttcagatactacagattacagtcagataccttactctacagac
aacacctggactgccccagagcagcctcctccaaggccgttgaccccggagaagtattct
gttcctcatcgctgtgctcggtttggtccggctggtcagctgatcctcgtccaacccaac
ctgccctctgctggccagcctacacttgtagaaatccacagtatggagatgattctgcag
gattctccagagcagtcagaaatgcgttcattccctggcccactcgtcaaagaggagact
cataaggtggatgtcataaagtttgctcagaacaaagcccaagagtgtttgcgaaacgat
gacctcatcgacaaagactccgcctacctcatctgggagttcattgtgctgctgtgtcgc
cagaatgggacggtagtgggcacagacatcgctgacctgttactgaaggagcatcgctct
gtctggttgccgggaaaatcacccaatgaggctaatctcatcgacttcaacaatgaagca
atagagcatgctgaggagaaagaggcggggccaatatcccttctgtcagacactttcatg
ggcgtgccagagaatgtcggcaaggagacggagcgcttcagagaactactacttttcggc
cgcaagaaggatgctctggagtctgctatgaagaaaggcctgtggggtcacgcgctgtta
ctggccagtaagatggacaacagaacacacgctcgtgtcatgaccagatttgccaacagc
ctgcctattaacgaccctcttcagacggtgtaccagctcatgtcaggacgaatgccagct
gctgctacttgttgcggagatgagaaatggggcgattggcgccctcatctggccatggtg
ctgtccaacctcacacacactctagatcttgacacccgcaccatttccaccatgggggac
actttagcatctaaaggtctagtggatgcagcccatttctgttacctgatggctcagttg
ggttttggcgtttacaccaagaaaagcaccaagatggtccttattggctccaatcacagc
ttgccatttttgaagttctgctcgtcagaggcgattcagcgtacagaatcatatgaatac
gctcagtctcttagctcacagcctctctctctgccgaacttccaggtgttcaagttcatc
tacgcgtgtcgactggcggagacgggactctgcgctcaggccttacattactgtgaggtc
atctctcgcaccctgttgagcctacctgagtacttctcacctgtgttcgtcagtcagctc
atacagatgtctctgaggttgaggttctttgaccctcagctgaaggagagaccagagcag
gagttatttatagagcctgactggttactgcatcttagacagctcgatgggcagatcaag
gatggtgcgatcaccttacgtgcggatcacagcaccccacagctttatcactgcagtaca
cccagttcagaagaccactgcagcccacctgacccctcgactctgaaccctgatccccac
aatcctctcatgacctcccttatgccctcagctggtgttcagctcatgccaccagctcct
cccactattcttcaggatggggcggtccctctgcagcaggctccgccttctggtgaaagt
gttccgttctacccagtagcccctgggccaccacagccaaaattttcagcacctttccta
cctgaaatgcatgaccaatacatgctcatgccaccccaaatacccacacaaataccccaa
caaatgtccccacaaattccaacgtacagccctacagaaaggcctccacagatgccgcca
ggaatgcctcctcagatgcccccaccaatgcctcggtccgaacatggctctgtccctccc
tctcctcagcagttcccccagtcatctccctcgttctctgccccccctccacaagggaag
gacttctatgatgaaatggcacgcatgggccctggcagaagatcaagaaccacttcccag
tcatctgtgcaaatgggtcctcggtctcgcacaacatcagaatcgtccaatcattctgga
cgggagcgcagcagttctctagccaatcagggctctccacctccccctcctatcccagag
gctccgccacaggacgaacccaagaagaccaagaaagactctccccaaaaaggagcgagt
ggtggctggctgacctggctgtatccgaagcggaagaacgaagctcatctgcccgacgac
aagaacaaatctattgtctgggatgaaaagaagcagaaatgggtgaatctggatgaacca
gaggaagagagcaaaccccctcctcctccacccaccggcttccccaaagctccaatggga
gggatgaggcctccaggagcgggtggtcctccaggggggccacctgtgaatatgttctcc
aggagagcgggtactaagagccgttatgtggacgtgttgaatcccggtcgtggaggatct
aaaccggcagctgcagtaccgcctcctgctgacctgtttgctcctctcgctcccatggct
atgccagccaacctcttcacaccagctgcagccccagctgagcagcagcagcagcagccg
atggagggaagcgttccagaagccagtggagaaaacccagcgcagactagtgccacggtg
ccacagatgtttaatccgaatgctttgcctcctggcccggagggaacccagtctggagag
ctgtcacgttctagctcaatgagttctctatctcgagaagtgagtcagcatttaaatcag
gttcccgcggagccgccagcacaaggagctccacctgcaggaggcgtgacgttttataac
ccctcccagtttgcacagtctgttcccacaagccgcactcgacctggtcgtctggcacag
agaggatataaacagtga
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integrated database retrieval system
