Carassius gibelio (silver crucian carp): 127941317
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Entry
127941317 CDS
T08819
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127941317
04082 Neuroactive ligand signaling
127941317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127941317
Ion channels [BR:
cgib04040
]
Ligand-gated channels
GABA-A
127941317
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
127941317
NCBI-ProteinID:
XP_052392219
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Position
A21:21277899..21301754
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AA seq
514 aa
AA seq
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MKSARELRALGSIIISSSSLELKSSTAHISEHLLLASRQKRRVRKFDDKWGYILWRMMWG
GRGAAWLWIWACLLVSSVLAGKSSSQSADEQKDNTTVFTRILDSLLDGYDNRLRPGLGER
VTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASKIWTP
DTFFHNGKKSVAHNMTMPNKLLRIKEEGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKY
GSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVMTTHF
HLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSL
PKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLKK
NNTYTAATATTFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKAPEAKKTFNSVSKIDRI
ARIAFPLLFGTFNLVYWATYLNKKPKIQGALQPH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgcgcgagagctgcgcgcgctcggcagcatcatcatcagcagcagcagcctc
gagctcaaatccagcacagctcacatctcagagcatcttctcctcgcatccagacagaaa
agacgtgtgcgaaagtttgacgataagtggggatacatcctttggagaatgatgtggggt
ggaagaggagcagcttggctttggatttgggcctgtttactggtgtccagcgttctggct
gggaaaagctccagtcaaagcgcagatgagcagaaagacaacaccacagttttcaccagg
attctggacagcctcctcgatggctacgacaaccgtctcaggcctgggctcggagagcgt
gtaaccgaagtcaagactgacattttcgtgacgagtattgggccggtctcggaccatgac
atggagtacaccatcgatgtgttcttcaggcagagctggaaggacgagaggctgaagttt
aaaggtcccatggcagtgctccgtctcaacaatctcatggccagcaaaatctggacgccc
gacacgtttttccacaacggaaagaagtcagtcgcccataacatgaccatgcctaacaaa
cttctgcggatcaaagaggaaggaacgctgctgtacaccatgaggcttacagtcagagct
gaatgtccaatgcacttggaggacttcccgatggacgcccatgcttgccctctcaaatac
ggcagctacgcctacacgagggctgaggtggtgtacgtttggacgcgaggggcggcgcag
tctgtggtcgtggctgacgatggctcccgtctcaaccagtatgacttgatgggacagacg
gtcgactcgggtgtggtgcagtccagcactggagagtatgttgtgatgaccacacatttc
cacctcaagaggaagatcggttactttgtcatccagacatatttgccgtgcatcatgacc
gtgatcctgtcccaggtgtccttctggctcaacagggaatctgtccccgccagaactgtg
tttggagtgaccactgtcctcaccatgaccaccctgagtatcagcgccagaaactctctg
cccaaggtggcctacgccacagccatggactggttcatcgccgtctgctacgcctttgtc
ttctcggctctgattgagtttgccactgtaaactacttcaccaagagggggtacgcctgg
gacgggaaaagtgtggtgcccgagaagcaaaagaagaagaaggagtcattgctgaaaaag
aacaacacctacacggctgcgacggcgacgacgtttgctccgaacattgccagagaccct
ggtttggcaactattgctaaaagtgccccccctccaccaaccgagcccaaggaagagccg
aaacccaaagcccccgaggccaagaagaccttcaacagcgtgagcaagatcgacaggatc
gccagaatagctttcccgctgctcttcggaacctttaacttggtgtattgggcaacttac
ttgaataaaaaacccaaaatacagggcgccctgcagccacactaa
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