Carassius gibelio (silver crucian carp): 127941422
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Entry
127941422 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127941422
00071 Fatty acid degradation
127941422
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127941422
09143 Cell growth and death
04216 Ferroptosis
127941422
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127941422
03320 PPAR signaling pathway
127941422
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127941422
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127941422
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127941422
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127941422
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127941422
Exosomal proteins of breast cancer cells
127941422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127941422
NCBI-ProteinID:
XP_052392394
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All DBs
Position
A21:21803121..21824028
Genome browser
AA seq
708 aa
AA seq
DB search
MSLELSSSLMEKMQSRDLLLGVPELDDLGQFLRSLPTSTLLGLGALTAVLVYWISTRPRP
ITPPCDLRLQSQEVQMEDGARRSLISDSSTLLSYYHEDAKTMYEVFQRGLHITGDGPFLG
SRLPNQPYKWLSYREVSSRAEHLGSGLLSQGCQPSPDQFIGVFAQNRPEWIISELACYTY
SMVVVPLYDTLGPDAIRYIINTAEISTVICDKAEKASVLLENVQRGETPGLKMIILMDAF
DTQLLEEAQKCSVHIRALRDVEALGREHYRKPVPPAADDLSIVCFTSGTTGDPKGVMLTH
GNVVADFGGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIEAVVICHGGRIGFFQGDIRL
LPDDMKALRPTIFPVVPRLLNRMYDKIFSQANTSLKRWLLNFAAKRKGLEVRRGVIRSDS
VWDKIFFHKIQASLGGRLRMIITGAAPASPIVLDFLRAALGCQVYEAYGQTECTAGCTYT
TPGDWTAGHVGAPLPCNLIKLLDVAEKNYFAAKGEGEICVKGPNVFKGYLKDPVRTAETL
DADGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIESIYIRSEPVSQLYVHG
DSLQSCLVGVIVPDPEVLPSWAQKKGFVGSYDELCGNKEIKKAILEDMVCLGRASGLHSF
EQVKDIHIHKEMFSVQNGLLTPTLKAKRPELKQYFKTEIEQLYSNISM
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgagctcagctcctcacttatggagaagatgcagtctcgggatctgctgcta
ggtgttcctgagctggatgatttgggtcagttcctgcgctctctgcccacctccacgctg
ctgggtctgggtgctctgaccgctgtgctggtctactggatctccacccggccgcggccc
atcacaccgccctgcgacctccggctccagtcacaggaagtgcagatggaggatggtgct
cggaggtccctgataagcgacagctccacgctgctctcgtactaccacgaggacgccaag
accatgtacgaggtgtttcagcgaggtctgcacatcaccggtgacggaccctttttaggc
tccagactccccaatcaaccctacaaatggctgtcctacagagaggtgtccagcagggcg
gagcacttgggctctggtttactgtctcaggggtgtcagcccagtccggatcagttcatc
ggggtgtttgctcagaacaggcctgagtggatcatctcggagctggcgtgctacacctac
tccatggtggtggttcccctgtacgacacgctgggacccgacgccatccgctacatcatc
aacacagctgagatctccacagtgatctgtgataaagcagagaaagcgtcggttctcctg
gagaacgtccagcgaggagagacgccggggctgaagatgatcatcctcatggatgccttt
gacactcagctgctggaagaagctcagaagtgcagcgttcacatccgggcgctcagagat
gtggaggctctgggtcgagagcactacaggaaacctgtgcctcccgcagcagatgacctg
tccatcgtctgcttcaccagtggaaccacaggagacccgaagggagtgatgctgacccac
gggaacgtcgtggctgacttcgggggcttcttgaaagtgacagataaggtgatctttcca
aaccaagatgacgttctcatttccttcctgcctcttgctcacatgttcgagagactgatc
gaggcggtggtcatctgtcacggcgggaggattggcttcttccaaggagatatccgtctg
cttccggacgacatgaaggctctccggcccaccatattcccagtggtgcctcgactcctg
aaccgcatgtatgacaagatcttcagtcaggccaacacctcgctcaagcgctggctgctg
aacttcgcggctaagaggaaagggctggaggtgcgccgcggcgtgatccgcagtgatagc
gtatgggacaagatcttcttccacaagatccaggccagtctgggcggcaggttacggatg
atcatcaccggagcggctcctgcgtccccgatcgtcctggacttcctgagagcggcgctc
ggctgtcaggtgtacgaggcgtacggtcagacggagtgcaccgctggatgcacctacacc
actcctggagactggacggccggtcacgtaggcgctccgctgccctgtaatctcatcaaa
ctgctggatgtggctgagaagaactactttgctgctaaaggagaaggagagatttgtgtg
aagggcccaaacgtgttcaagggttatctgaaggatcctgtgaggacggctgagacgctg
gacgcagacggatggcttcacactggagacattggcaaatggctgccgaacggcacgctg
aagatcatcgacaggaagaagcacatcttcaagttagctcaaggagagtatatttccccg
gagaagatcgagagcatctacatccgcagcgagcccgtgtctcagctctatgttcacggg
gacagcctgcagtcgtgtctggtgggagtcatcgtccccgatcctgaggtcttaccctcc
tgggctcagaagaagggcttcgtgggaagctatgacgagctgtgtggaaataaagaaatt
aagaaagccattctggaggacatggtgtgcttgggaagagctagtggcctccattcattc
gaacaggttaaagacatccacatccataaagaaatgttctccgtccagaacggattgctg
acccccactttaaaagccaagagaccggagctgaagcagtacttcaagacagaaatcgag
cagctgtacagcaacatctccatgtag
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