KEGG   Carassius gibelio (silver crucian carp): 127941472
Entry
127941472         CDS       T08819                                 
Name
(RefSeq) nectin-1-like isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03266  Virion - Herpesvirus
cgib04514  Cell adhesion molecule (CAM) interaction
cgib04517  IgSF CAM signaling
cgib04520  Adherens junction
cgib05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    127941472
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    127941472
   04517 IgSF CAM signaling
    127941472
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    127941472
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127941472
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgib04515]
    127941472
   04090 CD molecules [BR:cgib04090]
    127941472
Cell adhesion molecules [BR:cgib04515]
 Immunoglobulin superfamily
  Nectin family
   127941472
CD molecules [BR:cgib04090]
 Proteins
  127941472
SSDB
Motif
Pfam: C2-set_2 Ig_2 Ig_3 V-set ig I-set Ig_PVRIG Syndecan
Other DBs
NCBI-GeneID: 127941472
NCBI-ProteinID: XP_052392493
LinkDB
Position
A21:complement(11234637..11258046)
AA seq 501 aa
MYIINMILLKVVLPLMSIVLTRGVHGQMVQMDSSKSGFVGTQVELRCQFVNSNPPVKISQ
VTWQKLVNGTKQNIAIANPALGVSVLNPFKERVHFKNLAIRQRTPSLEDTTIVFSKLKLS
DESTYICEYTTFPAGNRENMVNLTVYARPTIQMSLSTPSIAAGTKDLKMTVATCVSANGK
PPSVITWETDLDGESNTQEIRNPDGTVTVRSDFLVVPSREIHQQLLTCISTYNEEQYTDS
VMLNIQYEPEVIIEGFDGNWYLNRENVQLTCLADANPPISLFQWRYLNGTMPSKAELRDD
VLIFKGPVTYDIAGTYICDATNSIGTGSASVEIIVTEFPSYLHEVSQEPQQAGAIIGGAV
VCGTVLLAAITLLVVFFYRRRCMFKGDYSTKKQILGNGYSVAGSAPSHPSLPHSLTFSED
SDEEKKLEIYRGSNTLGRTVQEFHCHDSRMKAYHAGLIEDHERFERSEQTYIYDYGSEVE
VSVDMIPQMDGSVISKEEWYV
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtacatcataaacatgatacttttgaaagtggttcttccactgatgtccatcgttttg
acacgaggtgttcatggtcaaatggtccagatggacagcagtaagtcaggatttgtgggc
acacaggtagagctacgctgtcagtttgtcaacagcaacccacctgtaaaaatctcacag
gtcacctggcagaagcttgtcaatggcaccaagcagaacattgccattgccaatccagcc
ctgggggtgtcggtactgaaccccttcaaagagcgtgtgcatttcaagaacctggccatc
cgccagcgcacgccatccctggaggacaccaccatagtcttcagcaaactaaaactgtcg
gatgagtccacctacatctgcgagtacacaaccttcccagctggcaacagggagaacatg
gttaatctcactgtttatgctcgtcctacgatccagatgagtctgtccacaccctccata
gcagcaggaaccaaagatctgaagatgactgttgccacgtgcgtttctgccaatgggaag
ccacccagtgtgatcacatgggaaactgatttagatggagaatccaacactcaggagata
cgcaaccctgatgggacagtcactgtgcgcagtgatttcttggtggttcccagtcgagaa
atacaccaacagttgctcacctgcatctccacatataatgaggaacaatacacagacagt
gtgatgctcaacattcagtatgaaccagaggtgataatagagggcttcgatgggaactgg
tatttgaacagagaaaacgttcagctcacctgcttggctgatgccaacccacccatctct
ttgtttcagtggagatacttgaatggaactatgccgagtaaagcagagcttcgcgatgat
gtgctaatctttaaaggtcccgtaacttatgacatcgctggcacatacatctgtgacgcc
accaacagcattgggacaggctctgcgtctgttgagatcattgtcacagaattccctagc
tacctacacgaggtgtctcaggagccacagcaagcaggtgccatcattggtggagctgtt
gtttgtggtacagtgctgttggccgctattacactcctggtagtgtttttctatcgccgg
agatgcatgtttaaaggagattacagtaccaagaagcaaatccttggaaatggttacagc
gttgctggcagcgcgccatcacacccctcgctacctcacagtctgaccttctccgaagac
tcggatgaagagaagaagctggaaatttacagaggctccaataccttaggaagaactgtt
caggagttccattgccatgacagcaggatgaaggcctaccacgcaggactgatcgaggac
catgagagattcgaacgtagcgagcagacttacatttatgattatggatctgaggtggag
gtctcagtggatatgattcctcagatggacggctctgtcatctctaaagaagagtggtat
gtgtag

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