Carassius gibelio (silver crucian carp): 127941472
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Entry
127941472 CDS
T08819
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03266
Virion - Herpesvirus
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04517
IgSF CAM signaling
cgib04520
Adherens junction
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
127941472
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127941472
04517 IgSF CAM signaling
127941472
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
127941472
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127941472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127941472
04090 CD molecules [BR:
cgib04090
]
127941472
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Nectin family
127941472
CD molecules [BR:
cgib04090
]
Proteins
127941472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_2
Ig_3
V-set
ig
I-set
Ig_PVRIG
Syndecan
Motif
Other DBs
NCBI-GeneID:
127941472
NCBI-ProteinID:
XP_052392493
LinkDB
All DBs
Position
A21:complement(11234637..11258046)
Genome browser
AA seq
501 aa
AA seq
DB search
MYIINMILLKVVLPLMSIVLTRGVHGQMVQMDSSKSGFVGTQVELRCQFVNSNPPVKISQ
VTWQKLVNGTKQNIAIANPALGVSVLNPFKERVHFKNLAIRQRTPSLEDTTIVFSKLKLS
DESTYICEYTTFPAGNRENMVNLTVYARPTIQMSLSTPSIAAGTKDLKMTVATCVSANGK
PPSVITWETDLDGESNTQEIRNPDGTVTVRSDFLVVPSREIHQQLLTCISTYNEEQYTDS
VMLNIQYEPEVIIEGFDGNWYLNRENVQLTCLADANPPISLFQWRYLNGTMPSKAELRDD
VLIFKGPVTYDIAGTYICDATNSIGTGSASVEIIVTEFPSYLHEVSQEPQQAGAIIGGAV
VCGTVLLAAITLLVVFFYRRRCMFKGDYSTKKQILGNGYSVAGSAPSHPSLPHSLTFSED
SDEEKKLEIYRGSNTLGRTVQEFHCHDSRMKAYHAGLIEDHERFERSEQTYIYDYGSEVE
VSVDMIPQMDGSVISKEEWYV
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcataaacatgatacttttgaaagtggttcttccactgatgtccatcgttttg
acacgaggtgttcatggtcaaatggtccagatggacagcagtaagtcaggatttgtgggc
acacaggtagagctacgctgtcagtttgtcaacagcaacccacctgtaaaaatctcacag
gtcacctggcagaagcttgtcaatggcaccaagcagaacattgccattgccaatccagcc
ctgggggtgtcggtactgaaccccttcaaagagcgtgtgcatttcaagaacctggccatc
cgccagcgcacgccatccctggaggacaccaccatagtcttcagcaaactaaaactgtcg
gatgagtccacctacatctgcgagtacacaaccttcccagctggcaacagggagaacatg
gttaatctcactgtttatgctcgtcctacgatccagatgagtctgtccacaccctccata
gcagcaggaaccaaagatctgaagatgactgttgccacgtgcgtttctgccaatgggaag
ccacccagtgtgatcacatgggaaactgatttagatggagaatccaacactcaggagata
cgcaaccctgatgggacagtcactgtgcgcagtgatttcttggtggttcccagtcgagaa
atacaccaacagttgctcacctgcatctccacatataatgaggaacaatacacagacagt
gtgatgctcaacattcagtatgaaccagaggtgataatagagggcttcgatgggaactgg
tatttgaacagagaaaacgttcagctcacctgcttggctgatgccaacccacccatctct
ttgtttcagtggagatacttgaatggaactatgccgagtaaagcagagcttcgcgatgat
gtgctaatctttaaaggtcccgtaacttatgacatcgctggcacatacatctgtgacgcc
accaacagcattgggacaggctctgcgtctgttgagatcattgtcacagaattccctagc
tacctacacgaggtgtctcaggagccacagcaagcaggtgccatcattggtggagctgtt
gtttgtggtacagtgctgttggccgctattacactcctggtagtgtttttctatcgccgg
agatgcatgtttaaaggagattacagtaccaagaagcaaatccttggaaatggttacagc
gttgctggcagcgcgccatcacacccctcgctacctcacagtctgaccttctccgaagac
tcggatgaagagaagaagctggaaatttacagaggctccaataccttaggaagaactgtt
caggagttccattgccatgacagcaggatgaaggcctaccacgcaggactgatcgaggac
catgagagattcgaacgtagcgagcagacttacatttatgattatggatctgaggtggag
gtctcagtggatatgattcctcagatggacggctctgtcatctctaaagaagagtggtat
gtgtag
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